Miyakogusa Predicted Gene

Lj0g3v0234959.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0234959.1 Non Chatacterized Hit- tr|I3SIC1|I3SIC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,93.65,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; eIF2alpha
middle domain-like,Trans,
gene.Ljchr0_pseudomol_20120828.path1.gene24152.1
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02820.1                                                       202   5e-53
Glyma11g35600.1                                                       202   5e-53

>Glyma18g02820.1 
          Length = 340

 Score =  202 bits (515), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 105/126 (83%), Gaps = 3/126 (2%)

Query: 1   MYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGR 60
           MYE KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSE             KVGR
Sbjct: 9   MYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGR 68

Query: 61  IEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLNIDLE--- 117
           IEPVMVLRVDKEKGYIDLSKRRVSEEDIQ CEERYNKSKLVHSIMRHVAETLNIDLE   
Sbjct: 69  IEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLNIDLEELY 128

Query: 118 VHTYIP 123
           +H   P
Sbjct: 129 IHIGWP 134


>Glyma11g35600.1 
          Length = 340

 Score =  202 bits (515), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 105/126 (83%), Gaps = 3/126 (2%)

Query: 1   MYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGR 60
           MYE KYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSE             KVGR
Sbjct: 9   MYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGR 68

Query: 61  IEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLNIDLE--- 117
           IEPVMVLRVDKEKGYIDLSKRRVSEEDIQ CEERYNKSKLVHSIMRHVAETLNIDLE   
Sbjct: 69  IEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLNIDLEELY 128

Query: 118 VHTYIP 123
           +H   P
Sbjct: 129 IHIGWP 134