Miyakogusa Predicted Gene

Lj0g3v0234039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0234039.1 Non Chatacterized Hit- tr|I3T494|I3T494_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,71.93,9e-17,seg,NULL; DNase-RNase,Bifunctional nuclease;
Hypothetical protein TM0160,Bifunctional nuclease,CUFF.15382.1
         (328 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g07830.1                                                       345   4e-95
Glyma1784s00200.1                                                     275   6e-74
Glyma17g37160.1                                                       176   2e-44
Glyma11g08700.4                                                       117   1e-26
Glyma11g08700.1                                                       117   1e-26
Glyma11g08700.6                                                       116   3e-26
Glyma11g08700.5                                                       116   3e-26
Glyma01g36640.1                                                       111   1e-24
Glyma11g08700.3                                                        88   1e-17
Glyma11g08700.2                                                        88   1e-17

>Glyma14g07830.1 
          Length = 250

 Score =  345 bits (885), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 174/253 (68%), Positives = 196/253 (77%), Gaps = 13/253 (5%)

Query: 1   MGSLKGPVVC---LAKVAGSCSVSMPMIGSMNS-----RTEFWXXXXXXXXXXXXXXXXX 52
           M S++GPVVC    AK  G CS+  PMIG++       R+EFW                 
Sbjct: 1   MSSVQGPVVCPSVRAKQVGFCSI--PMIGAVKMNVRRIRSEFWGLNGAKAKPGFLSC--- 55

Query: 53  HVNMRRCMTVHCXXXXXXXXXXXMAENFNQNDEDYVNSSIVEAVEVKSGADGFLIKMRDG 112
           H+N R+C TVHC            A+NFN+ DEDYV SS++EAVEVKSGADGF+IKMRDG
Sbjct: 56  HINTRKCKTVHCTFNSPSNDSGSTADNFNEKDEDYVISSVIEAVEVKSGADGFIIKMRDG 115

Query: 113 RHVRCIHNNPQGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARP 172
           RH+RC+HNNPQGG LPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+RNV IARP
Sbjct: 116 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRNVPIARP 175

Query: 173 TLYQVVKEMIDKMGYQVRAVRVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAV 232
           TLYQVVKEMIDKMGY+V+ VRVT+RVHEAYFAQ+YL+KVGN+ E VSFDLRPSDAINIAV
Sbjct: 176 TLYQVVKEMIDKMGYEVKFVRVTRRVHEAYFAQLYLTKVGNDAEYVSFDLRPSDAINIAV 235

Query: 233 RCKVPIQVNKYLA 245
           RCKVPIQVNK L 
Sbjct: 236 RCKVPIQVNKVLG 248


>Glyma1784s00200.1 
          Length = 209

 Score =  275 bits (703), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 140/213 (65%), Positives = 159/213 (74%), Gaps = 13/213 (6%)

Query: 1   MGSLKGPVVC---LAKVAGSCSVSMPMIGSMNS-----RTEFWXXXXXXXXXXXXXXXXX 52
           M S++GPVVC    AK  G CS+  PMIG++       R+EFW                 
Sbjct: 1   MSSVQGPVVCPSVRAKQVGFCSI--PMIGAVKMNVRRIRSEFWGLNGAKAKPGFLSC--- 55

Query: 53  HVNMRRCMTVHCXXXXXXXXXXXMAENFNQNDEDYVNSSIVEAVEVKSGADGFLIKMRDG 112
            +N R+  TVHC            A+NFN+ DEDYVNSS++EAVEVKSGADGF+IKMRDG
Sbjct: 56  RINTRKYKTVHCTFNSPSNDSGSTADNFNEKDEDYVNSSVIEAVEVKSGADGFIIKMRDG 115

Query: 113 RHVRCIHNNPQGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARP 172
           RH+RC+HNNPQGG LPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAA+RNV IARP
Sbjct: 116 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRNVPIARP 175

Query: 173 TLYQVVKEMIDKMGYQVRAVRVTKRVHEAYFAQ 205
           TLYQVVKEMIDKMGY+V+ VRVT+RVHEAYFAQ
Sbjct: 176 TLYQVVKEMIDKMGYEVKLVRVTRRVHEAYFAQ 208


>Glyma17g37160.1 
          Length = 153

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/117 (73%), Positives = 95/117 (81%), Gaps = 1/117 (0%)

Query: 192 VRVTKR-VHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGM 250
           +RVT R ++     + Y   VGNE E VSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGM
Sbjct: 12  IRVTIRTLYHFLLKKTYFYLVGNEAEYVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGM 71

Query: 251 RVIESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAAL 307
           RVIESGKLSTQ PG DG LFTE+DRPS +PC+ET EFNLL NM+KAV EERY+DA  
Sbjct: 72  RVIESGKLSTQFPGMDGRLFTEMDRPSGQPCSETTEFNLLHNMLKAVVEERYKDAVF 128


>Glyma11g08700.4 
          Length = 324

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 5/184 (2%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A      +  P  YQ V+ ++ ++ ++V  V
Sbjct: 139 PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMV 198

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK PI V+K + ++D +R+
Sbjct: 199 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRI 257

Query: 253 IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDKL 312
              G     +          LD   + P    +E +++ NM  A+ +ER++DAA+WRDKL
Sbjct: 258 ---GYGMGGAHNKKAIYDVLLDSAIDGPDLVAQELSMMHNMHSAIKQERFKDAAIWRDKL 314

Query: 313 NQLR 316
             LR
Sbjct: 315 ANLR 318


>Glyma11g08700.1 
          Length = 324

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 5/184 (2%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A      +  P  YQ V+ ++ ++ ++V  V
Sbjct: 139 PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMV 198

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK PI V+K + ++D +R+
Sbjct: 199 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRI 257

Query: 253 IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDKL 312
              G     +          LD   + P    +E +++ NM  A+ +ER++DAA+WRDKL
Sbjct: 258 ---GYGMGGAHNKKAIYDVLLDSAIDGPDLVAQELSMMHNMHSAIKQERFKDAAIWRDKL 314

Query: 313 NQLR 316
             LR
Sbjct: 315 ANLR 318


>Glyma11g08700.6 
          Length = 225

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 5/184 (2%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A      +  P  YQ V+ ++ ++ ++V  V
Sbjct: 40  PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMV 99

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK PI V+K + ++D +R+
Sbjct: 100 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRI 158

Query: 253 IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDKL 312
              G     +          LD   + P    +E +++ NM  A+ +ER++DAA+WRDKL
Sbjct: 159 ---GYGMGGAHNKKAIYDVLLDSAIDGPDLVAQELSMMHNMHSAIKQERFKDAAIWRDKL 215

Query: 313 NQLR 316
             LR
Sbjct: 216 ANLR 219


>Glyma11g08700.5 
          Length = 225

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 5/184 (2%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A      +  P  YQ V+ ++ ++ ++V  V
Sbjct: 40  PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMV 99

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK PI V+K + ++D +R+
Sbjct: 100 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRI 158

Query: 253 IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDKL 312
              G     +          LD   + P    +E +++ NM  A+ +ER++DAA+WRDKL
Sbjct: 159 ---GYGMGGAHNKKAIYDVLLDSAIDGPDLVAQELSMMHNMHSAIKQERFKDAAIWRDKL 215

Query: 313 NQLR 316
             LR
Sbjct: 216 ANLR 219


>Glyma01g36640.1 
          Length = 305

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 18/184 (9%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A   +  +  P  YQ V+ ++ ++ ++V  V
Sbjct: 133 PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEHESVECPDQYQFVENLVGRLDHEVIMV 192

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK  I V+K + ++D +R+
Sbjct: 193 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAAIYVSKEIVFTDAIRI 251

Query: 253 IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDKL 312
                        DGP                +E +++ NM  A+ +ER++DAA+WRDKL
Sbjct: 252 ----GYGMGGVAVDGPDLV------------AQELSMMHNMRIAIKQERFKDAAIWRDKL 295

Query: 313 NQLR 316
             LR
Sbjct: 296 ANLR 299


>Glyma11g08700.3 
          Length = 281

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 2/120 (1%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A      +  P  YQ V+ ++ ++ ++V  V
Sbjct: 139 PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMV 198

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK PI V+K + ++D +R+
Sbjct: 199 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRI 257


>Glyma11g08700.2 
          Length = 281

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 2/120 (1%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLM-AAVRNVQIARPTLYQVVKEMIDKMGYQVRAV 192
           P I L++      +LPI+V ++    LM A      +  P  YQ V+ ++ ++ ++V  V
Sbjct: 139 PTIFLRISCDGDYILPIVVGQIAIEKLMDAESEQESVECPDQYQFVENLVGRLDHEVIMV 198

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S D RPSDAIN+A RCK PI V+K + ++D +R+
Sbjct: 199 RITERVVSTYFARLYLSQPG-KTDLISVDARPSDAINVANRCKAPIYVSKEIVFTDAIRI 257