Miyakogusa Predicted Gene

Lj0g3v0234009.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0234009.2 Non Chatacterized Hit- tr|B9TAY8|B9TAY8_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,28.9,0.000000000000001,RNI-like,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; F-box,F-box domain,
cycl,CUFF.15331.2
         (551 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20850.1                                                       559   e-159
Glyma08g20860.1                                                       187   2e-47
Glyma15g02580.1                                                        87   4e-17
Glyma13g42870.1                                                        64   5e-10
Glyma01g10160.3                                                        51   4e-06
Glyma01g10160.2                                                        50   5e-06
Glyma01g10160.1                                                        50   5e-06
Glyma02g14150.1                                                        50   9e-06

>Glyma08g20850.1 
          Length = 552

 Score =  559 bits (1441), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/550 (54%), Positives = 379/550 (68%), Gaps = 5/550 (0%)

Query: 1   MDDDHISDLPIIILHDILSRLPEKDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLT 60
           M++  I +LP I+LHDILSRLPEKDAAR SVLSK WAE  STFPILSF+ +++I     +
Sbjct: 7   MEEGQIENLPDIVLHDILSRLPEKDAARTSVLSKKWAEIWSTFPILSFTDTEIIEKFPHS 66

Query: 61  TEEEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESG 120
            +++    +K F++ V +T LRF ++GL IKE +L+++CFD   +S+ +D W+KLA+ESG
Sbjct: 67  RKDDLVGGKKKFINRVNETFLRFRNKGLVIKEFKLSINCFDLEDLSKDIDHWMKLASESG 126

Query: 121 VEVLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSX 180
           V VLELCL   +E  +     CY+LPTG++EA+SL KLVL G I VDQAF+ HS+KF S 
Sbjct: 127 VGVLELCLHDEFEDDQ-----CYILPTGIIEAESLYKLVLMGRIGVDQAFLNHSVKFLSL 181

Query: 181 XXXXXXXXXXXXXQVIEYLISRCPLIEYVTLTFCSVLKPGGAGGLLRSRAFKMKSMSMRG 240
                        QVIE+LIS CPLIE +TL  C  +  GG  G L+      +S+SM G
Sbjct: 182 RVLSLWFIFSRDEQVIEHLISCCPLIEDITLHVCYAMNHGGLDGPLKYDTSWKQSISMLG 241

Query: 241 LLKLKGVDIIGIQEVYVDSPSLENLCYCADDFYLTCKLEFERCKNLKSLHLGHFKSTVIT 300
           L KLK V+++GIQ+V +D+PSLE+  +         ++ F +C+NL+ L+L    S +IT
Sbjct: 242 LPKLKKVEVLGIQKVVIDAPSLEDFHFSPGAVDEPFEMSFGKCRNLRRLYLSSLDSLIIT 301

Query: 301 QKWFIELFLKFPFLEILKLDNCTMSERICISSDKLTVLMLSKCSNLKEVIIDAPNLSSCQ 360
             WF++LF KFPFL+ LK   C MSE I ISS +L VL LS CSNLKEV IDAPNL SC+
Sbjct: 302 DNWFLDLFPKFPFLDSLKFSFCKMSETINISSAQLKVLELSNCSNLKEVNIDAPNLLSCE 361

Query: 361 YVGHRAPKPIISFLRSSSQLEVNVEMYFDHLDLSDLREFIQNFKPQNVLASLSLSIDQSI 420
           Y G  A KPIISFL SSS LEV   +  D +++ +LRE IQNFKPQN+LASLSL I   I
Sbjct: 362 YSGGGASKPIISFLNSSSNLEVKAFIEIDFMEVGNLREIIQNFKPQNILASLSLFIQPPI 421

Query: 421 VDEFNPIVLQDSSPPPIIKHLNLQSVPENETLFWPVVNSLLSSCCPETISLCLHSYCCSR 480
           VDE N  +L  SS PP IKHL L  V ENETLF  +VNSLLS CCP TISLC ++   SR
Sbjct: 422 VDELNLDILPVSSTPPSIKHLYLWVVLENETLFMHLVNSLLSCCCPVTISLCGYTLSFSR 481

Query: 481 AFIEFLYETLVGRKENDCFCSSGSAKCWWHGLKGVKITNTSNTDGNADFKTTLDALPTWG 540
           AFIEF YETL+GRKE +CFC  G  KCWWHGLK VK++++  ++ + DFKT  DALPT+ 
Sbjct: 482 AFIEFFYETLMGRKEEECFCGYGHTKCWWHGLKDVKVSSSRKSEESIDFKTLFDALPTFL 541

Query: 541 DFDNIIFRLE 550
             +NIIFRLE
Sbjct: 542 PGENIIFRLE 551


>Glyma08g20860.1 
          Length = 237

 Score =  187 bits (476), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/224 (50%), Positives = 139/224 (62%), Gaps = 36/224 (16%)

Query: 1   MDDDHISDLPIIILHDILSRLPEKDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLT 60
           M+ D IS LP  ILHDILSR+PE+DA R SVLSK+WAET ST+PIL FS + ++G     
Sbjct: 1   MERDMISTLPKTILHDILSRMPEEDAVRTSVLSKSWAETWSTYPILYFSDTMIVGTFP-R 59

Query: 61  TEEEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESG 120
             E+F   RKNF+D+VK+TLLRFH QGLAIK+ +L ++ FD  YMS  VD WLKLA+ESG
Sbjct: 60  PWEDFLRKRKNFIDHVKRTLLRFHTQGLAIKQFRLIIN-FDLQYMSLDVDHWLKLASESG 118

Query: 121 VEVLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSX 180
           V+VLE+CLP  +E  E+    CY+LPT +    SL  ++L+                   
Sbjct: 119 VQVLEICLPKGHEQDEKALDPCYILPTVL----SLWSVLLED------------------ 156

Query: 181 XXXXXXXXXXXXXQVIEYLISRCPLIEYVTLTFCSVLKPGGAGG 224
                        Q IE+LIS CPLIE VTL  CSVL  GG GG
Sbjct: 157 ------------EQAIEHLISCCPLIEDVTLKCCSVLNNGGIGG 188


>Glyma15g02580.1 
          Length = 398

 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 175/437 (40%), Gaps = 95/437 (21%)

Query: 4   DHISDLPIIILHDILSRLPE-KDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLTTE 62
           D IS  P  ++H ILS L    DA R SVLSK W E   ++ +L F      GM      
Sbjct: 10  DRISQFPDHVIHHILSHLRNVNDAIRTSVLSKRWRELWYSYSVLIFDERNNKGMM----- 64

Query: 63  EEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESGVE 122
                    F DYV  +LL  + + L I++L L++  FD    +  ++LWL +A    ++
Sbjct: 65  ---------FRDYVSNSLLTSNAKNLQIRKLVLHMTSFDLLEDAPCLELWLNIAIYRNIK 115

Query: 123 VLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSXXX 182
            L+L +  +      G   CY LP  V  +K+L  + L G        +K          
Sbjct: 116 ELDLHVGIK-----NGE--CYTLPQTVFSSKTLTGIRLSGCKLGTCNNIK-----LPYLQ 163

Query: 183 XXXXXXXXXXXQVIEYLISRCPLIEYVTLTFCSVLKPGGAGGLLRSRAFKMKSMSMRGLL 242
                        I+ LIS C  +E + +  CS LK      L+R     +K   +   +
Sbjct: 164 KLYLRKIPLVENFIQNLISCCHSVEDLRIIKCSGLKHLHVSNLIR-----LKRAEIHHCI 218

Query: 243 KLKGVDIIGIQEVYVDSPSLENLCYCADDFYLTCKLEFERCKNLKSLHLGHFKSTVITQK 302
           +LK             SP               CK+  E C +LK L L H +   +T+ 
Sbjct: 219 QLKK----------KTSP---------------CKVSLEGCTSLKRLTLEHPQ---VTRD 250

Query: 303 WFIELFLKFPFLEILKLDNCTMSERICISSDKLTVLMLSKCSNLKEVIIDAPNLSSCQYV 362
           +    F  FP LE L L                      +C  L  V+++APNL S +  
Sbjct: 251 FCENQFSNFPLLEKLDL----------------------RCKKLGIVLVEAPNLLSFECK 288

Query: 363 GHRAPKPIISFLRSSSQLEVNVEMYFDHLDLSDLREFIQNFKPQNVLASLSLSIDQSIV- 421
           G   P   +SF+  S   E  V  Y D + +  ++ FIQ F  +     L L  ++SIV 
Sbjct: 289 GETMPWAKLSFVPKS---EPRVVGYGDKIWIR-MKSFIQKFNRERF--KLVLYSNKSIVI 342

Query: 422 -DEFNPIVLQDSSPPPI 437
            ++ N ++L     PP+
Sbjct: 343 HEDLNNVIL-----PPV 354


>Glyma13g42870.1 
          Length = 344

 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 119/299 (39%), Gaps = 57/299 (19%)

Query: 26  AARASVLSKAWAETLSTFPILSFSISKMIGMCSLTTEEEFSMIRKNFVDYVKKTLLRFHD 85
           A R SVLSK W E   +F +L F   K          E+ S     F +YV  +LL  + 
Sbjct: 26  AIRTSVLSKRWRELWHSFSVLIFDERKFAAKIG---PEDSSNKEMMFRNYVSNSLLIRNA 82

Query: 86  QGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESGVEVLELCLPYRYELKEEGRLCCYVL 145
           + + I++  L++  FD    +  ++LWL +A    ++ L+L +  +      G   CY L
Sbjct: 83  KKMQIRKSVLHMTSFDLLEDTPCLELWLTIAFYRNIKELDLHVGIK-----NGE--CYTL 135

Query: 146 PTGVLEAKSLKKLVLKGGIF--VDQAFMKHSIKFFSXXXXXXXXXXXXXXQVIEYLISRC 203
           P  VL +K+L  + L G      +   + +  K +                 I+ LISRC
Sbjct: 136 PQTVLSSKTLTGIRLSGCKLGTCNNIMLPYLQKLY-------LRKIPLVENFIQNLISRC 188

Query: 204 PLIEYVTLTFCSVLKPGGAGGLLRSRAFKMKSMSMRGLLKLKGVDIIGIQEVYVDSPSLE 263
             IE + +  CS LK                                    V + +P+L+
Sbjct: 189 HSIEDLRIIKCSGLKH---------------------------------LHVEISAPNLD 215

Query: 264 NLCYCADDFYLTCKLEFERCKNLKSLHLGHFKSTVITQKWFIELFLKFPFLE-ILKLDN 321
              YC       CK+  E C +LK L L H   T +T  +    F  FP LE +LKL N
Sbjct: 216 TFWYCGKKTS-PCKVSLEGCTSLKRLTLEH---TQVTCDFCENQFSNFPLLEKMLKLTN 270


>Glyma01g10160.3 
          Length = 307

 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 25/213 (11%)

Query: 1   MDDDHISDLPIIILHDILSRLPEKDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLT 60
           M  D ISDLP  I+  IL +LP +DA R S+LS  W    ++   L F        C   
Sbjct: 5   MGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITRLVFD-----DKCVPF 59

Query: 61  TEEEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESG 120
           + +   ++ K+ V ++ + L  F  QG  I + Q+             +D W+   + + 
Sbjct: 60  SNDR-EVVEKSVVKFITRVL--FLRQG-PIHKFQITNSKLQ---SCPEIDQWILFLSRND 112

Query: 121 VEVLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSX 180
           ++ L + L        EG    + +P+ +     L +L L    F       HS K F  
Sbjct: 113 IKELVMEL-------GEGEF--FRIPSSLFNCGKLTRLDLSRCEFDP----PHSFKGFVC 159

Query: 181 XXXXXXXXXXXXXQVIEYLISRCPLIEYVTLTF 213
                          IE LISRCPL+E ++L++
Sbjct: 160 LRSLNLHQVLISPDAIESLISRCPLLESLSLSY 192


>Glyma01g10160.2 
          Length = 421

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 25/213 (11%)

Query: 1   MDDDHISDLPIIILHDILSRLPEKDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLT 60
           M  D ISDLP  I+  IL +LP +DA R S+LS  W    ++   L F   K +   +  
Sbjct: 5   MGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITRLVFD-DKCVPFSN-- 61

Query: 61  TEEEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESG 120
              +  ++ K+ V ++ + L  F  QG  I + Q+             +D W+   + + 
Sbjct: 62  ---DREVVEKSVVKFITRVL--FLRQG-PIHKFQITNSKLQ---SCPEIDQWILFLSRND 112

Query: 121 VEVLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSX 180
           ++ L         + E G    + +P+ +     L +L L    F       HS K F  
Sbjct: 113 IKEL---------VMELGEGEFFRIPSSLFNCGKLTRLDLSRCEFDP----PHSFKGFVC 159

Query: 181 XXXXXXXXXXXXXQVIEYLISRCPLIEYVTLTF 213
                          IE LISRCPL+E ++L++
Sbjct: 160 LRSLNLHQVLISPDAIESLISRCPLLESLSLSY 192


>Glyma01g10160.1 
          Length = 421

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 25/213 (11%)

Query: 1   MDDDHISDLPIIILHDILSRLPEKDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLT 60
           M  D ISDLP  I+  IL +LP +DA R S+LS  W    ++   L F   K +   +  
Sbjct: 5   MGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITRLVFD-DKCVPFSN-- 61

Query: 61  TEEEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESG 120
              +  ++ K+ V ++ + L  F  QG  I + Q+             +D W+   + + 
Sbjct: 62  ---DREVVEKSVVKFITRVL--FLRQG-PIHKFQITNSKLQ---SCPEIDQWILFLSRND 112

Query: 121 VEVLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSX 180
           ++ L         + E G    + +P+ +     L +L L    F       HS K F  
Sbjct: 113 IKEL---------VMELGEGEFFRIPSSLFNCGKLTRLDLSRCEFDP----PHSFKGFVC 159

Query: 181 XXXXXXXXXXXXXQVIEYLISRCPLIEYVTLTF 213
                          IE LISRCPL+E ++L++
Sbjct: 160 LRSLNLHQVLISPDAIESLISRCPLLESLSLSY 192


>Glyma02g14150.1 
          Length = 421

 Score = 49.7 bits (117), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 25/213 (11%)

Query: 1   MDDDHISDLPIIILHDILSRLPEKDAARASVLSKAWAETLSTFPILSFSISKMIGMCSLT 60
           M  D ISDLP  I+  IL +LP +DA R S+LS  W    ++   L F   K +   +  
Sbjct: 5   MGPDLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASITQLVFD-DKCVPFSN-- 61

Query: 61  TEEEFSMIRKNFVDYVKKTLLRFHDQGLAIKELQLNVDCFDFHYMSRHVDLWLKLAAESG 120
              +   + K+ V ++ + L  F  QG  I + Q+             +D W+   + + 
Sbjct: 62  ---DREAVEKSVVKFITRVL--FLHQG-PIHKFQITNSKLQ---SCPEIDQWILFLSRND 112

Query: 121 VEVLELCLPYRYELKEEGRLCCYVLPTGVLEAKSLKKLVLKGGIFVDQAFMKHSIKFFSX 180
           ++ L         + E G    + +P+ +     L +L L       +    HS K F+ 
Sbjct: 113 IKEL---------VMELGEGEFFRIPSNLFNCGKLTRLELSRC----ELDPPHSFKGFAG 159

Query: 181 XXXXXXXXXXXXXQVIEYLISRCPLIEYVTLTF 213
                          +E LISRCPL+E ++L +
Sbjct: 160 LRSLNLHQVLISPDAVESLISRCPLLESLSLAY 192