Miyakogusa Predicted Gene

Lj0g3v0233849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0233849.1 Non Chatacterized Hit- tr|D8SV13|D8SV13_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.6,5e-19,seg,NULL; ATP-DEPENDENT TRANSPORTER (ABCF1)
PLANT,NULL; ATP-BINDING TRANSPORT PROTEIN-RELATED,NULL,CUFF.15302.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g10530.1                                                       190   4e-49
Glyma20g16170.1                                                       186   4e-48

>Glyma13g10530.1 
          Length = 712

 Score =  190 bits (482), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 101/132 (76%)

Query: 1   MTEVARSVVHEVFGENIVDVDEPIVDYIVNVXXXXXXXXXXXXXXXXXXLGELLVAAGCV 60
           MTEVARSVVH+V G+ +VDVD+PIVDYIVNV                  LGELLVAAGCV
Sbjct: 1   MTEVARSVVHDVLGQRVVDVDQPIVDYIVNVLADDDFDFGLDGQGAFEALGELLVAAGCV 60

Query: 61  PDFPDCRTACSKLSDKFGKHGLVKEKPTVRSLTTPFRMNEGLDDGVAPKKKPEPVDGPLL 120
            DF  CR+ CS L DKFGKHGLVKEKP VRSL  PFRMNEG+DD  APKKKPEPVDGPLL
Sbjct: 61  DDFSHCRSVCSTLCDKFGKHGLVKEKPAVRSLAAPFRMNEGMDDVQAPKKKPEPVDGPLL 120

Query: 121 TERDKLKLERRK 132
           +ERD+LKLERRK
Sbjct: 121 SERDRLKLERRK 132


>Glyma20g16170.1 
          Length = 712

 Score =  186 bits (473), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 100/132 (75%)

Query: 1   MTEVARSVVHEVFGENIVDVDEPIVDYIVNVXXXXXXXXXXXXXXXXXXLGELLVAAGCV 60
           MTEVARSVVH+V G+ +VDVD+PIVDYIVNV                  LGELLVAA CV
Sbjct: 1   MTEVARSVVHDVLGQRVVDVDQPIVDYIVNVLADDDFDFGLDGEGAFDALGELLVAADCV 60

Query: 61  PDFPDCRTACSKLSDKFGKHGLVKEKPTVRSLTTPFRMNEGLDDGVAPKKKPEPVDGPLL 120
            DF  CR+ CS L DKFGKHGLVKEKP VRSL  PFRMNEG+DD  APKKKPEPVDGPLL
Sbjct: 61  DDFSHCRSVCSTLCDKFGKHGLVKEKPAVRSLAAPFRMNEGMDDVQAPKKKPEPVDGPLL 120

Query: 121 TERDKLKLERRK 132
           +ERD+LKLERRK
Sbjct: 121 SERDRLKLERRK 132