Miyakogusa Predicted Gene

Lj0g3v0233439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0233439.1 tr|G7K7Q6|G7K7Q6_MEDTR Oligoribonuclease
OS=Medicago truncatula GN=MTR_5g088330 PE=4
SV=1,80.42,0,OLIGORIBONUCLEASE, MITOCHONDRIAL,NULL;
RNase_T,Exonuclease, RNase T/DNA polymerase III; no
descripti,CUFF.20834.1
         (235 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04450.1                                                       379   e-105
Glyma02g44360.1                                                       355   3e-98

>Glyma14g04450.1 
          Length = 242

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/243 (78%), Positives = 210/243 (86%), Gaps = 10/243 (4%)

Query: 1   MENLANSFSVLELDADDSDVQPLPTSGTTGKKVNGKADTPLVNTDKQDPENP------YK 54
           ME LANSFSVLELDADDS V    T+  + K+VN   D   V ++KQ+ ENP      YK
Sbjct: 1   MEKLANSFSVLELDADDSHVPT--TADISDKRVNADVDIVPVKSEKQNQENPVTPSCEYK 58

Query: 55  LPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKSVEGPDLVIHQTKECLDRMGEWCQSH 114
           LPLVWIDLEMTGLNIEVDRILEIACIITDGNLTK+VEGPDLVIHQTKECLDRMGEWCQSH
Sbjct: 59  LPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKTVEGPDLVIHQTKECLDRMGEWCQSH 118

Query: 115 HAASGLTKRVLESTISEREAEKQVIDFVKKH--VGKYTPLLAGNSIYVDLQYLKKYMPEL 172
           HAASGLTK+VL+STISE EAE+QVI+FVK++  VG +TP LAGNSIYVD Q+LKKYMP+L
Sbjct: 119 HAASGLTKKVLKSTISEGEAEEQVIEFVKRYVNVGSHTPHLAGNSIYVDFQFLKKYMPKL 178

Query: 173 AGLFPHVLVDVSSVKALCIRWYPRDQKKAPIKENKHRALDDIRESIEELRYYKANIFKPK 232
           A LF HVLVDVSSVKALCIRWYP+DQK+AP K N+HRALDDIRESIEELRYYKANIFKPK
Sbjct: 179 ASLFSHVLVDVSSVKALCIRWYPKDQKRAPSKLNRHRALDDIRESIEELRYYKANIFKPK 238

Query: 233 SKK 235
           S+K
Sbjct: 239 SRK 241


>Glyma02g44360.1 
          Length = 241

 Score =  355 bits (910), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 187/243 (76%), Positives = 210/243 (86%), Gaps = 10/243 (4%)

Query: 1   MENLANSFSVLELDADDSDVQPLPTSGTTGKKVNGKADTPLVNTDKQDPENP------YK 54
           ME LANSFSVLELDADDS V    T+G++ K+VN   D     ++KQ+ ENP      YK
Sbjct: 1   MEKLANSFSVLELDADDSHVPT--TAGSSDKRVNADIDIVPGKSEKQNLENPVTSSCEYK 58

Query: 55  LPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKSVEGPDLVIHQTKECLDRMGEWCQSH 114
           LPLVWIDLEMTGLNIEVDRILEIACIITDGNLTK+VEGPDLVIHQTKECLDRMGEWCQSH
Sbjct: 59  LPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKTVEGPDLVIHQTKECLDRMGEWCQSH 118

Query: 115 HAASGLTKRVLESTISEREAEKQVIDFVKKH--VGKYTPLLAGNSIYVDLQYLKKYMPEL 172
           HAASGLTK+VL+STISE EAEKQVI+FVK++  VG YTPLLAG+SIYVD Q+LKKYMP+L
Sbjct: 119 HAASGLTKKVLKSTISEGEAEKQVIEFVKRYVNVGLYTPLLAGSSIYVDFQFLKKYMPKL 178

Query: 173 AGLFPHVLVDVSSVKALCIRWYPRDQKKAPIKENKHRALDDIRESIEELRYYKANIFKPK 232
           A LF HV+VDVSSVKALCIRWYP+D+++AP K   HRALDDIRESIEELRYYKANIFKP+
Sbjct: 179 ASLFSHVVVDVSSVKALCIRWYPKDKERAPSKLKTHRALDDIRESIEELRYYKANIFKPR 238

Query: 233 SKK 235
           S+K
Sbjct: 239 SRK 241