Miyakogusa Predicted Gene

Lj0g3v0232319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0232319.1 Non Chatacterized Hit- tr|G8A099|G8A099_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,79.47,0,no
description,ATPase-like, ATP-binding domain; ATPase domain of HSP90
chaperone/DNA topoisomerase I,CUFF.15232.1
         (601 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g22620.1                                                       949   0.0  
Glyma05g38400.1                                                       343   3e-94
Glyma08g11730.1                                                       172   1e-42

>Glyma03g22620.1 
          Length = 1702

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/605 (75%), Positives = 525/605 (86%), Gaps = 5/605 (0%)

Query: 1   MAATPKEHVEEIRSNKFSIGGKPNPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNQ 60
           M  TPKEH+E+IR  KFSIGG+PNPL EDLHQA KNLS ELYAKDVHFLMEL+QNAEDN+
Sbjct: 1   MEITPKEHIEKIRRTKFSIGGEPNPLREDLHQATKNLSTELYAKDVHFLMELVQNAEDNK 60

Query: 61  YPEGVSPALEFIITSEDITDSGAPATLLIFNNEKGFSPRNIESVCSVGRSTKKDSRSSGY 120
           Y EGVSP+LEFIITS+DIT +GA ATLLIFNNEKGFS  NIES+CSVGRSTKK +RSSGY
Sbjct: 61  YAEGVSPSLEFIITSKDITATGASATLLIFNNEKGFSRENIESICSVGRSTKKGNRSSGY 120

Query: 121 IGEKGIGFKSVFLVTAQPYIFSNGYQIRFNEKPCPHCCLGYVVPEWVEEKPTLQDIRQIY 180
           IGEKGIGFKSVFL+TA PYIFSNGYQIRF+EKPCPHC +GY+VPEWVE+KPTL DI+QIY
Sbjct: 121 IGEKGIGFKSVFLLTAYPYIFSNGYQIRFSEKPCPHCDIGYIVPEWVEQKPTLHDIKQIY 180

Query: 181 GKD--SLPTTTIVLPLKSDKVNAVKQQLSSIHPEVLLFLSKIRQLSVREHNKNPKLNTVA 238
           G    SLPTTTI+LPLK DKV  VK QLS+IHPEVLLFLSKIR LSVRE N++PKLN+V 
Sbjct: 181 GAGAGSLPTTTIILPLKPDKVKPVKHQLSNIHPEVLLFLSKIRHLSVREDNEDPKLNSVN 240

Query: 239 AVSISSEINFMTRKNMNAESYTLHLSAEESSNSGKECSYYMWKKKFPVRVENVVERRTGV 298
           AVSISSEINF TRKNMNAESYTLHLSA E+  S KEC YYMWK+KFPVR ENVV+RR  V
Sbjct: 241 AVSISSEINFCTRKNMNAESYTLHLSAAENGGSEKECRYYMWKQKFPVRFENVVDRREDV 300

Query: 299 EEWVITLAFPNQERLHRGLSSPGVYAFLPTEMATNFPFIIQADFVLASSRETILMDDKWN 358
           EE ++TLAFPNQERLHRG S PGVYAFLPTEM TNFPFIIQADFVLASSRETIL+D KWN
Sbjct: 301 EELIVTLAFPNQERLHRGKSLPGVYAFLPTEMVTNFPFIIQADFVLASSRETILLDSKWN 360

Query: 359 QGILECIPTAFMDAFKTLVIGSDEAPVSSLTQMFRFLPIESSPYEKLNHVRDQIKAKLLE 418
           QGILEC+P+AFMDAFKTLV+GSD+AP+S L  +FRFLPI+SSP+EKLN+VR++IK K+L 
Sbjct: 361 QGILECVPSAFMDAFKTLVLGSDQAPISCLPPVFRFLPIDSSPFEKLNYVREKIKEKMLG 420

Query: 419 EAIVPIETYTKQKHFYKPREVGRLLPEFWNILSKARSEQVYLLDLSSHDGRKILSSAFDR 478
           E+I+PIETY +QKHFYKP EV RLLPEFW+IL++A++E+VYL +LSSH+GRKILSS+FD+
Sbjct: 421 ESIIPIETYGEQKHFYKPCEVSRLLPEFWDILAEAQAERVYLHNLSSHNGRKILSSSFDK 480

Query: 479 SVYDRILNFLEVKPVNVDWYAKCIQSSNLVDGVSEEVYLELLLFVTENWLTMFKDSKMAR 538
             YD IL+FL ++ VN DWYAKCIQSSNLVDGVSE VYL LLLF+  NW + FK SK+  
Sbjct: 481 IEYDDILSFLGIQQVNTDWYAKCIQSSNLVDGVSEVVYLNLLLFIATNW-SSFKSSKVTD 539

Query: 539 VPLIKYVGPDGSLSHFSFYDCTQ--GSKQVVLADSSESCPCSWLIDWNKEFACSSNKFFM 596
           +PLIKYV  DG+LSHF+   C+   G+KQVVLAD S+   CSWLIDWN EF+C +++FFM
Sbjct: 540 IPLIKYVDSDGNLSHFTLDQCSNRYGAKQVVLADPSQPSLCSWLIDWNSEFSCKTSRFFM 599

Query: 597 PESTQ 601
           PE TQ
Sbjct: 600 PEVTQ 604


>Glyma05g38400.1 
          Length = 1276

 Score =  343 bits (881), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 200/383 (52%), Positives = 239/383 (62%), Gaps = 103/383 (26%)

Query: 146 QIRFNEKPCPHCCLGYVVPEWVEEKPTLQDIRQIY--GKDSLPTTTIVLPLKSDKVNAVK 203
           Q R ++K  PHC LGY+VPEWVE+ P L+DI+QIY  G D+LPTTTI+LPLKSDK     
Sbjct: 65  QQRISDKVAPHCGLGYIVPEWVEQNPALEDIKQIYRAGDDTLPTTTIILPLKSDKK---- 120

Query: 204 QQLSSIHPEVLLFLSKIRQLSVREHNKNPKLNTVAAVSISSEINFMTRKNMNAESYTLHL 263
                      LFLSKI++LS+RE N++PKL+T+ +V+ISSEINFMTRKN+NAESYTL L
Sbjct: 121 -----------LFLSKIKRLSIREDNEDPKLSTLGSVAISSEINFMTRKNINAESYTLCL 169

Query: 264 SAEESSNSGKECSYYMWKKKFPVRVENVVERRTGVEEWVITLAFPNQERLHRGLSSPGVY 323
           S EE+ NS KE     W       +EN VERR  V+E VITLAFPNQERL RG + PGVY
Sbjct: 170 SEEENRNSEKE-----W-------LENRVERRMDVDELVITLAFPNQERLQRGKTLPGVY 217

Query: 324 AFLPTEMATNFPFIIQADFVLASSRETILMDDKWNQGILECIPTAFMDAFKTLVIGSDEA 383
           AFLPTEM +NFPFIIQADF              WNQGIL+C+P+AFM+AFK+LV G D+A
Sbjct: 218 AFLPTEMISNFPFIIQADF--------------WNQGILDCVPSAFMEAFKSLVKGIDKA 263

Query: 384 PVSSLTQMFRFLPIESSPYEKLNHVRDQIKAKLLEEAIVPIETYTKQKHFYKPREVGRLL 443
           P+SSL +MF FLP               IKAKL++E IVPIETY +QKHFYK  E     
Sbjct: 264 PLSSLARMFLFLP---------------IKAKLVQEKIVPIETYKQQKHFYKLCE----- 303

Query: 444 PEFWNILSKARSEQVYLLDLSSHDGRKILSSAFDRSVYDRILNFLEVKPVNVDWYAKCIQ 503
                                                   ILNFL V  V  + YAKCIQ
Sbjct: 304 ----------------------------------------ILNFLGVLFVYNELYAKCIQ 323

Query: 504 SSNLVDGVSEEVYLELLLFVTEN 526
           SSNLV+G SE VYL++LLF+  N
Sbjct: 324 SSNLVEGASEGVYLKILLFMLIN 346


>Glyma08g11730.1 
          Length = 2642

 Score =  172 bits (435), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 207/414 (50%), Gaps = 66/414 (15%)

Query: 9    VEEIRSNKFSIGGKPNPLTE--------DLHQAVKNLSAELYAKDVHFLMELIQNAEDNQ 60
            +E IR ++F +    + +           L +A+  LS ELY++D HF++EL+QNA+DN 
Sbjct: 1017 IESIRRDEFGLDSSLSDIDSCMLKKQHARLGRALHCLSQELYSQDSHFILELVQNADDNN 1076

Query: 61   YPEGVSPALEFIITSEDITDSGAPATLLIFNNEKGFSPRNIESVCSVGRSTKKDSRSSGY 120
            YPE V P L FI     + DSG    +++ NNE+GFS +N+ ++C VG STKK S ++GY
Sbjct: 1077 YPENVEPTLTFI-----LRDSG----IVVLNNERGFSAQNMRALCDVGNSTKKGS-TAGY 1126

Query: 121  IGEKGIGFKSVFLVTAQPYIFSNGYQIRFNEKPCPHCCLGYVVPEWVEEKPTLQDIRQIY 180
            IG+KGIGFKSVF VT  P I SNG+ ++F+        +G+V+P  V     +  +R++ 
Sbjct: 1127 IGKKGIGFKSVFRVTDAPEIHSNGFHVKFD---ISEGQIGFVLPT-VVPPCDIGVLRRMA 1182

Query: 181  GKDSLP------TTTIVLPLKSD-----KVNAVKQQLSSIHPEVLLFLSKIRQLSVREHN 229
              D+         T I+LP +S       +N+V    S +HP +LLFL +++ + +R   
Sbjct: 1183 STDTELCDDNPWNTCILLPFRSHLSEGMAMNSVLSMFSDLHPSLLLFLHRLKCIKLRN-- 1240

Query: 230  KNPKLNTVAAVSISSEINFMTRKNMNAESYTLHLSAEESSNSGKECSYYMWKKKFPVRVE 289
                LN    V          +K ++ +         + S+  ++  +++  +K      
Sbjct: 1241 ---LLNDTLTV---------MKKEISGDGII------KVSHGKEKIVWFVVSQKLQTN-- 1280

Query: 290  NVVERRTGVEEWVITLAFPNQERLHRGLSSPG---VYAFLPTEMATNFPFIIQADFVLAS 346
                 R  V+   I++AF  QE  +  +       V+AFLP        FI+Q DFVL S
Sbjct: 1281 ---SIRFDVQTTEISMAFTLQESDNGYIPCSDQQPVFAFLPLR-TYGLKFILQGDFVLPS 1336

Query: 347  SRETILMDDKWNQGILECIPTAFMDA---FKTLVIGSDEAPVSSLTQMFRFLPI 397
            SRE +  D  WNQ +L   P  F+ A   F  L     E P   L+    F+P+
Sbjct: 1337 SREEVDGDSPWNQWLLSEYPNLFVRAQREFCELPCFRSE-PGKGLSAFMSFVPL 1389