Miyakogusa Predicted Gene

Lj0g3v0230969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230969.1 Non Chatacterized Hit- tr|Q5SNE7|Q5SNE7_ORYSJ
Putative uncharacterized protein P0512G09.2-1
OS=Oryza,44.14,5e-19,seg,NULL; DDE_4,NULL; UNCHARACTERIZED,Harbinger
transposase-derived
nuclease,gene.Ljchr0_pseudomol_20120828.path1.gene23772.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23150.2                                                        59   2e-09

>Glyma20g23150.2 
          Length = 402

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 4/126 (3%)

Query: 13  WIVGTSGCPLLDWXXXXXXXX-XXXXQHTLNDKIFKIQEVAKEAFSRLKGRWSILQLIDV 71
           +I+G +G PL  W             Q   N ++ + Q VAK+A +RLK  W I+Q +  
Sbjct: 272 YIIGDTGFPLFSWLLTPYEGKGFSNVQVEFNKRVVETQMVAKKALARLKDMWKIIQGVMW 331

Query: 72  KP--KELYLTLGVCCVLHNICEMNGDEIDPGLKF-HLMDDELLPQIADLTSKSAKKARDK 128
           KP   +L   + VCC+LHNI     DE+   +   H  D     Q ++    +A   R+K
Sbjct: 332 KPDKHKLPRIILVCCILHNIVIDMEDEVLIDMPSCHQHDSRYQDQTSEFADNTATIMREK 391

Query: 129 IAEYLA 134
           ++ YL+
Sbjct: 392 LSLYLS 397