Miyakogusa Predicted Gene

Lj0g3v0230509.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230509.2 Non Chatacterized Hit- tr|K4BTQ5|K4BTQ5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.87,2e-18,seg,NULL; APOPTOTIC CHROMATIN CONDENSATION INDUCER
IN THE NUCLEUS,NULL,CUFF.15082.2
         (436 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02310.1                                                       497   e-140
Glyma11g36120.1                                                       484   e-136

>Glyma18g02310.1 
          Length = 677

 Score =  497 bits (1280), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/304 (80%), Positives = 270/304 (88%), Gaps = 4/304 (1%)

Query: 46  TRPEMVQEPSSRNDEPV-YDESNSMDVGGLHEKKASVEENTNNITSPDFNKTINSDDAGY 104
            +PEMV+EPSSRND PV YDES+SMDVGGLHEKKASVEEN NN+ SPD NKT +SDD GY
Sbjct: 267 VKPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENFNNVLSPDMNKTNSSDDVGY 326

Query: 105 PEKLNLDRSSGDDSMEEDVPETKQFDSKFNVDELSLRDKGENIEVSIVKEENNTVVVGDG 164
           PE+LNLDRSSGDDSMEED+PETKQ DSKFNVDEL  +DK E IE  IVKEE++T+ VGDG
Sbjct: 327 PEELNLDRSSGDDSMEEDLPETKQIDSKFNVDEL--KDKIE-IEEPIVKEESSTIAVGDG 383

Query: 165 LSAGKSDTNLDIDMSPVALADKRKYAEQASVGNNEPAKRQRRWSTETRKGADLQSTTPRP 224
           LSAG+SD + DID+SPVA  +KRK+ EQASVGNNEPAKRQRRW+TET KG D QSTTPRP
Sbjct: 384 LSAGESDIHQDIDISPVAPTEKRKFNEQASVGNNEPAKRQRRWNTETVKGPDAQSTTPRP 443

Query: 225 PTTPKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPFTLKAVQEL 284
            TTP+DEP+A KRNF RSDS A  D PKERIVPP QR+PTNSLRIDRFLRPFTLKAVQEL
Sbjct: 444 ATTPRDEPIALKRNFSRSDSSATDDTPKERIVPPPQRSPTNSLRIDRFLRPFTLKAVQEL 503

Query: 285 LGKTGKVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLIAEYVDPEDVK 344
           LGKTG VSSFWMDQIKTHCYVTYSS++EA ETRNAVYNLQWPPNGGRLL+AEYVDPE+VK
Sbjct: 504 LGKTGNVSSFWMDQIKTHCYVTYSSVDEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVK 563

Query: 345 MKLE 348
           MKLE
Sbjct: 564 MKLE 567


>Glyma11g36120.1 
          Length = 682

 Score =  484 bits (1245), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/303 (79%), Positives = 265/303 (87%), Gaps = 7/303 (2%)

Query: 47  RPEMVQEPSSRNDEPV-YDESNSMDVGGLHEKKASVEENTNNITSPDFNKTINSDDAGYP 105
           +PEMV+EPSSRND PV YDES+SMDVGGLHEKKASVEEN NN++SPD NKT +SDD GY 
Sbjct: 275 KPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENINNVSSPDLNKTNSSDDVGYS 334

Query: 106 EKLNLDRSSGDDSMEEDVPETKQFDSKFNVDELSLRDKGENIEVSIVKEENNTVVVGDGL 165
           EKLNLDRSSGDDSMEED+PETKQ DSKFNVDEL  +DK E IE  IVKEE++T+ VGD L
Sbjct: 335 EKLNLDRSSGDDSMEEDLPETKQIDSKFNVDEL--KDKVE-IEKPIVKEESSTIAVGDSL 391

Query: 166 SAGKSDTNLDIDMSPVALADKRKYAEQASVGNNEPAKRQRRWSTETRKGADLQSTTPRPP 225
           SAGK DT+ DID+SP AL +KRK+ E   VGN+EPAKRQRRW+TET KG D QSTTPRP 
Sbjct: 392 SAGKDDTHQDIDISPAALTEKRKFNE---VGNSEPAKRQRRWNTETVKGPDAQSTTPRPA 448

Query: 226 TTPKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELL 285
           TTP+DEP+  KR+F RSDS A  D PKE IVPPSQR+PTNSLRIDRFLRPFTLKAVQELL
Sbjct: 449 TTPRDEPITLKRSFSRSDSSATDDTPKEHIVPPSQRSPTNSLRIDRFLRPFTLKAVQELL 508

Query: 286 GKTGKVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLIAEYVDPEDVKM 345
           GKTG VSSFWMDQIKTHCYVTYSS+EEA ETRNAVYNLQWPPNGGRLL+AEYVDPE+VKM
Sbjct: 509 GKTGNVSSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKM 568

Query: 346 KLE 348
           KLE
Sbjct: 569 KLE 571