Miyakogusa Predicted Gene

Lj0g3v0230059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230059.1 tr|G7K4U8|G7K4U8_MEDTR Cytochrome c oxidase
assembly protein COX15-like protein OS=Medicago truncatu,64.77,3e-19,
,NODE_74174_length_423_cov_20.888889.path1.1
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g47340.1                                                        86   1e-17
Glyma14g01420.1                                                        74   2e-14

>Glyma02g47340.1 
          Length = 455

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 9/87 (10%)

Query: 1  MFGRGTAFSILKRSREAA--IHKLRGTTTRPFSHPSAQESFKFLSPSIASHGFRAFRSLP 58
          MFGRGT +S+L+R +EA    HKLRGT   PFS+ S+   FKFLSP +++H F AFRS  
Sbjct: 1  MFGRGTVWSVLRRGKEACGGFHKLRGT---PFSYSSSSTPFKFLSPPVSTHCFHAFRSQL 57

Query: 59 IPKGH--HVSYTRSFSKVVSAGAEHKE 83
          IPKGH  HV   R+FSK+VS  AE KE
Sbjct: 58 IPKGHHVHVPQMRNFSKMVS--AEQKE 82


>Glyma14g01420.1 
          Length = 456

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 58/90 (64%), Gaps = 11/90 (12%)

Query: 1  MFGRGTAFSILKRSREAA-IHKL--RGTTTRPFSHPSAQES-FKFLSPSIASHGFRAFRS 56
          MFGRG  +S+ KR +EA  IHKL  RGT   PFS  S Q   FKFL+P +A+H   AFRS
Sbjct: 1  MFGRGMVWSVWKRGKEACKIHKLCLRGT---PFSSSSTQPPPFKFLTPPVATHYIHAFRS 57

Query: 57 LPIPKGH--HVSYTRSFSKVVSAGAEHKEG 84
             PKGH  HV   R+FSK+VS  AE KEG
Sbjct: 58 QLFPKGHHVHVPQMRNFSKMVS--AEQKEG 85