Miyakogusa Predicted Gene

Lj0g3v0229879.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0229879.2 tr|B9I7N3|B9I7N3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1097327 PE=3
SV=1,60.87,0.00000008,seg,NULL,CUFF.15033.2
         (330 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45910.1                                                       285   3e-77
Glyma14g02860.1                                                       103   2e-22

>Glyma02g45910.1 
          Length = 1077

 Score =  285 bits (730), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 158/296 (53%), Positives = 192/296 (64%), Gaps = 3/296 (1%)

Query: 36  HRRKMKLIQIVNKYNGIRNFTVPSNYIQFRAD-SCCLKRTSWGLNRYNDMRYKCSFPYET 94
            RRKM+  QI   YNG+RN TV  N++Q RAD SCCLK TS GLN+YN  RYK +F  ++
Sbjct: 33  QRRKMQSFQI--SYNGLRNSTVLRNFVQSRADFSCCLKGTSVGLNKYNGARYKRNFLCKS 90

Query: 95  PGRVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVPVAPYNHEFSTTAAKRALSGG 154
           P  +S    SNA             LNS    E Q R V +A  N+EFSTT   + LSGG
Sbjct: 91  PVCISSMKISNASTGTLEEMTEEEELNSLRPCEMQVRTVGMAACNNEFSTTTLGKKLSGG 150

Query: 155 DNRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDX 214
           D RGWT  K+KL E KKEMN  +KFER+ GS  ASN   S+ Q QAV +N  S +VLQD 
Sbjct: 151 DYRGWTMAKDKLTENKKEMNGSNKFERENGSFSASNGIASIAQNQAVPRNGDSIIVLQDP 210

Query: 215 XXXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNGDCSFDVTTEESSNA 274
                             +TDSE V+ Q+N SSL I +EK+  VNGD   D T ++S+NA
Sbjct: 211 GTHAPSSVNYSVLNNSKVLTDSEKVIHQYNGSSLGIGKEKVIVVNGDHGLDETAKDSTNA 270

Query: 275 TIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 330
           T+ ++A GTD+S+LRDRLCSIY+DILVVDNIPLAEEV+KMLT KY+HLIYACDTEV
Sbjct: 271 TLTKQACGTDQSKLRDRLCSIYDDILVVDNIPLAEEVSKMLTTKYRHLIYACDTEV 326


>Glyma14g02860.1 
          Length = 917

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 80/147 (54%), Gaps = 41/147 (27%)

Query: 184 GSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXXXITDSETVVRQF 243
           G+S   N++      QAV KN  SN+VLQD                         V    
Sbjct: 62  GTSAGLNKYNG---NQAVPKNGDSNIVLQDP---------------------GAHVPSSV 97

Query: 244 NESSLEISEEKITRVNGDCSFDVTTEESSNATIPREAHGTDKSRLRDRLCSIYEDILVVD 303
           N S L                   +++S+N T+ ++A GTD+S+LRDRLCSIY+DILVVD
Sbjct: 98  NYSVLN-----------------NSKDSTNVTLTKQARGTDQSKLRDRLCSIYDDILVVD 140

Query: 304 NIPLAEEVAKMLTGKYQHLIYACDTEV 330
           NI LAEEVAKMLT KY+HLIYACDTEV
Sbjct: 141 NIHLAEEVAKMLTTKYRHLIYACDTEV 167