Miyakogusa Predicted Gene
- Lj0g3v0228259.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0228259.1 tr|Q8GW36|Q8GW36_ARATH At3g13950 OS=Arabidopsis
thaliana GN=At3g13950/MDC16_7 PE=2 SV=1,47.62,3e-19,seg,NULL; PGG,PGG
domain,CUFF.14897.1
(204 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g19270.1 122 3e-28
Glyma03g32760.1 90 2e-18
Glyma16g00650.1 86 2e-17
Glyma16g00850.1 83 2e-16
Glyma16g00640.1 81 6e-16
Glyma07g04010.1 80 1e-15
Glyma07g04010.4 80 2e-15
Glyma07g04010.3 80 2e-15
Glyma07g04010.2 80 2e-15
Glyma10g04910.1 77 8e-15
Glyma03g32790.1 75 6e-14
Glyma13g27190.1 65 3e-11
Glyma0892s00200.1 60 2e-09
Glyma18g48310.1 58 8e-09
Glyma15g02150.1 57 1e-08
Glyma07g03990.1 56 2e-08
Glyma06g36910.1 53 3e-07
Glyma06g36840.1 52 6e-07
Glyma06g37040.1 48 7e-06
>Glyma13g19270.1
Length = 439
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
Query: 7 PTRAESQNGAYQRTESRYQNFKGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDT 66
P+ ++ ++ RY ++ NW+EE RG+LMVVATVIAT+TFQ AINPPGGVWQ DT
Sbjct: 241 PSHQSKRSNIWETLWLRYLKYQSNWIEEKRGTLMVVATVIATMTFQSAINPPGGVWQEDT 300
Query: 67 -NSQQGCAPDKICKAGTSVLAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRN 125
C ICKAGT+VLA+ LK+ F T SF +S ++LL+ISGF L N
Sbjct: 301 ITGGLNCTTYGICKAGTAVLAYDLPHGFLKFMTF---NTTSFFSSLAVVLLLISGFRLEN 357
Query: 126 RVVMWVLILIMCTSV 140
+++MW+L + M +++
Sbjct: 358 KLMMWILTMAMTSAI 372
>Glyma03g32760.1
Length = 413
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 83/152 (54%), Gaps = 28/152 (18%)
Query: 12 SQNGAYQRTESRYQNF-------KGNWMEEM--RGSLMVVATVIATLTFQIAINPPGGVW 62
S+N + +R++ F GNWM ++ R LMV ATV+AT+TFQ AI+PPGGVW
Sbjct: 193 SENQGHPNRWNRFERFCRTYLLDDGNWMMDIKTREQLMVAATVMATMTFQSAISPPGGVW 252
Query: 63 QTDTNSQQGCAPDKICKAGTSVLAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFP 122
Q AGT+V+ + S LK FI L + SF AS ++L+++SG P
Sbjct: 253 Q----------------AGTAVVGYAWSPDFLK---FIFLNSSSFFASLCVMLVLMSGLP 293
Query: 123 LRNRVVMWVLILIMCTSVFCTAGAYLIAIWMV 154
L N+VVM +L M + C Y+ A+ MV
Sbjct: 294 LENKVVMRILTFFMIVAASCMLLTYMWALGMV 325
>Glyma16g00650.1
Length = 202
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 28 KGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGC---APDKICKAGTSV 84
K W+++MRG L +V+TVIAT+TFQ A+NPPGGV + + C + D G S+
Sbjct: 32 KDEWLKDMRGVLSLVSTVIATMTFQSALNPPGGVRPGNESGVVQCPENSADNNPCPGESI 91
Query: 85 LAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMCTSVFCTA 144
LA D+ Y+IF++ T F +S + LL++SGFPL +R W+L + MC ++
Sbjct: 92 LAVLYPDE---YKIFLIWNTTCFISSLAVCLLLVSGFPLNHRFFTWLLSIGMCITISSLT 148
Query: 145 GAYLIAIWMVL-NPASRTVVRITRYYILFWV 174
Y+ MV +P T + I W+
Sbjct: 149 LTYMTGAGMVTPDPLWNTTNSMFNKVIYIWI 179
>Glyma16g00850.1
Length = 203
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 28 KGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPDKICK---AGTSV 84
K W+++MRG L +V+TVIAT+TFQ A+NPPGGV + + C +K G S+
Sbjct: 32 KDEWLKDMRGMLSLVSTVIATMTFQSALNPPGGVRPGNESGVVQCPVNKADNNPCPGESI 91
Query: 85 LAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMCTSVFCTA 144
LA D+ YE F++ T F +S + +L++ GFPL++R W+L + MC ++
Sbjct: 92 LAVVYPDE---YEKFLIWNTTCFISSLAVCVLLVGGFPLKHRFFTWLLSIGMCITISSLT 148
Query: 145 GAYLIAIWMV 154
Y+ MV
Sbjct: 149 LTYMYGAGMV 158
>Glyma16g00640.1
Length = 188
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 28 KGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCA------PDKICKAG 81
K W+++MRG+ + AT+I+TLTFQ AINPPGGV + C K G
Sbjct: 12 KDEWLKDMRGNPSLAATLISTLTFQTAINPPGGVRPAKESGHVLCPRSEDMLDGKNPCPG 71
Query: 82 TSVLAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMCTSVF 141
++LA D KY F+L TI F +S + LL++SGFPL +R W+L + MC ++
Sbjct: 72 EAILAVVFPD---KYFKFLLWNTICFVSSLAVCLLLVSGFPLNHRFFTWLLSIGMCLTIT 128
Query: 142 CTAGAYLIAIWMV 154
Y++ MV
Sbjct: 129 SLTLTYMVGAEMV 141
>Glyma07g04010.1
Length = 232
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 31 WMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPD-----KICKAGTSVL 85
W+++MRG+L ++ATVIAT+TFQ AINPPGG+ + C PD + G +VL
Sbjct: 20 WLKDMRGNLSLLATVIATMTFQSAINPPGGIRPASETGEITC-PDTSKNITVPCPGEAVL 78
Query: 86 AFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMC 137
+ +D Y F+ TI F++S + LL++SG PL NR +W + MC
Sbjct: 79 SVLKAD---TYNSFLYCNTICFASSLAVCLLLVSGLPLNNRFFIWFFSICMC 127
>Glyma07g04010.4
Length = 217
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 31 WMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPD-----KICKAGTSVL 85
W+++MRG+L ++ATVIAT+TFQ AINPPGG+ + C PD + G +VL
Sbjct: 20 WLKDMRGNLSLLATVIATMTFQSAINPPGGIRPASETGEITC-PDTSKNITVPCPGEAVL 78
Query: 86 AFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMC 137
+ +D Y F+ TI F++S + LL++SG PL NR +W + MC
Sbjct: 79 SVLKAD---TYNSFLYCNTICFASSLAVCLLLVSGLPLNNRFFIWFFSICMC 127
>Glyma07g04010.3
Length = 217
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 31 WMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPD-----KICKAGTSVL 85
W+++MRG+L ++ATVIAT+TFQ AINPPGG+ + C PD + G +VL
Sbjct: 20 WLKDMRGNLSLLATVIATMTFQSAINPPGGIRPASETGEITC-PDTSKNITVPCPGEAVL 78
Query: 86 AFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMC 137
+ +D Y F+ TI F++S + LL++SG PL NR +W + MC
Sbjct: 79 SVLKAD---TYNSFLYCNTICFASSLAVCLLLVSGLPLNNRFFIWFFSICMC 127
>Glyma07g04010.2
Length = 217
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 31 WMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPD-----KICKAGTSVL 85
W+++MRG+L ++ATVIAT+TFQ AINPPGG+ + C PD + G +VL
Sbjct: 20 WLKDMRGNLSLLATVIATMTFQSAINPPGGIRPASETGEITC-PDTSKNITVPCPGEAVL 78
Query: 86 AFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMC 137
+ +D Y F+ TI F++S + LL++SG PL NR +W + MC
Sbjct: 79 SVLKAD---TYNSFLYCNTICFASSLAVCLLLVSGLPLNNRFFIWFFSICMC 127
>Glyma10g04910.1
Length = 352
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 23 RYQNFKGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQ-GCAP-DKICKA 80
+Y ++ NW+EE RG+LMVVATVIAT+TF AI+ PGGVWQ DT + C ICKA
Sbjct: 263 KYLQYQSNWIEEKRGTLMVVATVIATMTFLSAISSPGGVWQEDTITGGFNCTTYGNICKA 322
Query: 81 GTSVLAFGDSDQKLKYEIFILLCTISFSASQTI 113
GT+VLA+ LK+ F T SF +S ++
Sbjct: 323 GTAVLAYDWPHGFLKFMTF---NTTSFFSSLSV 352
>Glyma03g32790.1
Length = 196
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 8/141 (5%)
Query: 18 QRTESRYQNFKGNWMEE-MRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQG--CAP 74
+R Y +GNW++ R L+VVAT+IAT+ F INPPGGVWQ DT +Q G C
Sbjct: 2 ERFFRTYLLEQGNWIDNGSRKHLLVVATMIATMAFTSVINPPGGVWQGDT-TQDGFACHD 60
Query: 75 DKICKAGTSVLAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLR-NRVVMWVLI 133
C+AGT+V+ + L + F+ ++SF S ++L+++ GFP+ N+VVMW+L
Sbjct: 61 YGFCEAGTAVMGY---VWPLAFVKFLSSNSLSFFLSLCVMLVLVIGFPVENNKVVMWMLA 117
Query: 134 LIMCTSVFCTAGAYLIAIWMV 154
+++ + C Y+ A+ ++
Sbjct: 118 VLIIGAATCMMFTYVWALGLI 138
>Glyma13g27190.1
Length = 160
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 25/160 (15%)
Query: 24 YQNFKGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQ---TDTNSQQGCAPDKICKA 80
+ +G +EEMRG L VVAT+I+ +TF +NPPGGV Q +D S + + + A
Sbjct: 1 FLQHQGERLEEMRGMLSVVATMISAMTFNAVMNPPGGVIQANGSDLRSWKNMLSNNVKDA 60
Query: 81 -----GTSVLAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILI 135
G +V + Q+ +E F++ I LL++SG PL+N V M +L +
Sbjct: 61 MELHPGRAVFL---TTQESDFESFVI-----------ITLLLVSGVPLKNEVTMGILSIG 106
Query: 136 MCTSVFCTAGAYLIAIWMVLNPASRTVVRITRYYILFWVG 175
C ++ +Y +M+ ++ + ++I W+G
Sbjct: 107 TCVTLTFLMLSYFFGGFML---GFKSANHVFHFWIYLWLG 143
>Glyma0892s00200.1
Length = 140
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 13/94 (13%)
Query: 34 EMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPDKICKAGTSVLAFGDSDQK 93
E R L+++ T++A +TFQ +NPPGGVWQ D + AG ++ A SD +
Sbjct: 18 ETRNILLIIFTLVAAVTFQAGVNPPGGVWQEDKDGHV---------AGRAIYA---SDTQ 65
Query: 94 LKYEIFILLCTISFSASQTIILLMISGFPLRNRV 127
Y +F++ T++FS S +IL + FP +
Sbjct: 66 -AYYVFLIFNTLAFSNSILVILSLTHKFPFHFEI 98
>Glyma18g48310.1
Length = 175
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Query: 34 EMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPDKICKAGTSVLAFGDSDQK 93
+ R L+++ T++A +TFQ +NPPGGVWQ +TN + AG ++ A SD++
Sbjct: 27 DTRNILLIIFTLVAAVTFQAGVNPPGGVWQ-ETNGEH--------IAGRAIYA---SDKQ 74
Query: 94 LKYEIFILLCTISFSASQTIILLMISGFPLR 124
Y +F++ T++FS S +IL + FP
Sbjct: 75 -AYYVFLIFNTLAFSNSILVILSLTHKFPFH 104
>Glyma15g02150.1
Length = 647
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 36/160 (22%)
Query: 8 TRAESQNGAY--QRTESRYQNFKGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTD 65
T+AE+ N Y Q +++ + R ++ +VA +IAT+TF INPPGGV+Q
Sbjct: 436 TKAENLNQLYYTQSRRNKHYEMHKEAILNARNTITIVAVLIATVTFAAGINPPGGVYQE- 494
Query: 66 TNSQQGCAPDKICKAGTSVLAFGDSDQKLKYEIFILLCTISFSASQTIILLMISGFPLRN 125
P + G S++ + +++F + I+ S +I+++++S P R
Sbjct: 495 -------GPMR----GKSMVG-----KTTAFKVFAISNNIALFTSLSIVIVLVSIIPFRR 538
Query: 126 R----------VVMWVLILIMCTSVFCTAGAYLIAIWMVL 155
+ VMWV + M T Y+ W++L
Sbjct: 539 KPQIRLLTITHKVMWVAVAFMAT-------GYVAGTWVIL 571
>Glyma07g03990.1
Length = 115
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 28 KGNWMEEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPD 75
K W+++MRG+L ++ATVIAT+TFQ AINPPGG+ + C PD
Sbjct: 6 KDEWLKDMRGNLSLLATVIATMTFQSAINPPGGIRPASETGEITC-PD 52
>Glyma06g36910.1
Length = 400
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 33 EEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPDKICKAGTSVLAFGDSDQ 92
EE R + +VVA +IAT T+Q A++PPGG++ +D + + I A
Sbjct: 266 EEERNAYLVVAALIATATYQAALSPPGGLYPSDVGTNNNTNGNSIMSAT----------- 314
Query: 93 KLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLILIMCTSVFCTAGAYLIAIW 152
++ +F + T SF +S I+L++ P+ N VMW+L + + F ++ IA+
Sbjct: 315 --EFSLFSVANTCSFMSSTFAIILLL---PMTN--VMWIL---LYSPPFFLQLSFFIAM- 363
Query: 153 MVLNPASRTVVRIT----RYYILFW 173
MV++P V +T Y +LF+
Sbjct: 364 MVISPTPLNVYVVTIFLAVYMLLFY 388
>Glyma06g36840.1
Length = 375
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 33 EEMRGSLMVVATVIATLTFQIAINPPGGVWQTDTNSQQGCAPDKICKAGTSVLAFGDSDQ 92
EE R + +VVA +IAT T+Q A++PPGG++ +D + + I AG
Sbjct: 259 EEERNAYLVVAALIATATYQAALSPPGGLYPSDVGTNNNTNGNSIMSAG----------- 307
Query: 93 KLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLIL---IMCTSVFCTAGAYLI 149
++ +F + SF AS I+L++ R ++MW L+ FCTA
Sbjct: 308 --EFNLFSIANMSSFMASTFGIILLLP----RTNILMWCLLYSPPFFLQISFCTA----- 356
Query: 150 AIWMVLNPASRTVVRITRYYILF 172
MV++PA V Y ++F
Sbjct: 357 --MMVISPAPLNV-----YVVMF 372
>Glyma06g37040.1
Length = 376
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 33 EEMRGSLMVVATVIATLTFQIAINPPGGVWQ----TDTNSQQGCAPDKICKAGTSVLAFG 88
EE R + +VVA +IAT T+Q A++PPGG++ T+ N+ A +S+ G
Sbjct: 243 EEERNAYLVVAALIATATYQAALSPPGGLYPSNVGTNNNTSHVVASTDSINDKSSIPKDG 302
Query: 89 DS-DQKLKYEIFILLCTISFSASQTIILLMISGFPLRNRVVMWVLI 133
+S ++ +F + T SF AS I+L++ P N V+W L+
Sbjct: 303 NSIMSATEFNLFSIANTCSFMASTFAIVLLL---PRMN--VIWYLL 343