Miyakogusa Predicted Gene

Lj0g3v0228129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0228129.1 Non Chatacterized Hit- tr|B9G849|B9G849_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,35.71,5e-19,Cellulose_synt,Cellulose synthase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.14879.1
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g38650.1                                                       172   1e-43
Glyma12g31830.1                                                       171   3e-43
Glyma12g31840.1                                                       167   3e-42
Glyma12g31810.1                                                       155   2e-38
Glyma06g46450.1                                                       121   3e-28
Glyma12g31800.1                                                       117   6e-27
Glyma12g31780.1                                                       100   7e-22
Glyma12g10330.1                                                        82   2e-16
Glyma06g46460.1                                                        69   1e-12
Glyma12g10300.1                                                        54   6e-08

>Glyma13g38650.1 
          Length = 767

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/146 (59%), Positives = 103/146 (70%), Gaps = 3/146 (2%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M I+RT+T+ F+GF S ML ++GISD+VFEIT K+ STS          RFTF+ESPVFV
Sbjct: 624 MCIIRTTTASFLGFLSAMLKLSGISDSVFEITDKKPSTSGADGNNADAGRFTFEESPVFV 683

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLV + A++IKFLGL    P HSGN CG+GE ISS+Y+IVCYWP          Y
Sbjct: 684 IGTTILLVHMTAMLIKFLGLQ---PTHSGNGCGLGESISSMYVIVCYWPYLKGLFARGKY 740

Query: 121 GIPFSTICKSAALAFAFVHFCRSTVM 146
           GIP STICKSA LA  FVHFCRS V+
Sbjct: 741 GIPLSTICKSAVLALVFVHFCRSNVI 766


>Glyma12g31830.1 
          Length = 741

 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 99/146 (67%), Gaps = 3/146 (2%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M I+RT+T+WF+GF S +L ++GISD VFEIT+KE STS          RFTFDESPVFV
Sbjct: 598 MCIIRTTTAWFVGFLSAVLKLSGISDTVFEITEKEQSTSGADGNNADAGRFTFDESPVFV 657

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLV L A++IKF GL P    HSGN  G+GEFI S YL+VCYWP          Y
Sbjct: 658 VGTTILLVHLTAMLIKFWGLQPN---HSGNGSGLGEFICSTYLVVCYWPYFKGLFARGKY 714

Query: 121 GIPFSTICKSAALAFAFVHFCRSTVM 146
           GIP STICKSA  A  FVHFC S V+
Sbjct: 715 GIPLSTICKSAVFALVFVHFCGSKVI 740


>Glyma12g31840.1 
          Length = 772

 Score =  167 bits (424), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 84/146 (57%), Positives = 98/146 (67%), Gaps = 3/146 (2%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           MS++ T+T+WFIGF S ML ++GISD VFEIT+KE STS          RFTFDESPVFV
Sbjct: 628 MSLVTTTTAWFIGFLSAMLKLSGISDTVFEITEKEQSTSGSDGNNADAGRFTFDESPVFV 687

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLV L A++IKF GL    P HS N  G+GEFI S YL++CYWP          Y
Sbjct: 688 VGTTILLVHLTAMLIKFWGLQ---PTHSENGSGLGEFICSTYLVMCYWPYFKGLFGRGKY 744

Query: 121 GIPFSTICKSAALAFAFVHFCRSTVM 146
           GIPFST+CKS   A  FVHFCRS  +
Sbjct: 745 GIPFSTMCKSVVFALVFVHFCRSNAI 770


>Glyma12g31810.1 
          Length = 746

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/144 (53%), Positives = 96/144 (66%), Gaps = 3/144 (2%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M I+RT+T+ F+GF +GM+ ++G+SD  F+IT+KE  TS          RFTF+ESPVFV
Sbjct: 603 MCIVRTTTASFLGFLNGMVQLSGLSDIAFDITEKEYPTSSADENSTDAGRFTFNESPVFV 662

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLV L A++IKF GL    P HSGN  G+GEFI S Y++VC+WP          Y
Sbjct: 663 IGTTILLVYLTAILIKFWGLQ---PTHSGNGSGLGEFICSTYVVVCFWPYLKGLFARGNY 719

Query: 121 GIPFSTICKSAALAFAFVHFCRST 144
           GIP S +CKSA  AF FVHFCRS 
Sbjct: 720 GIPLSIMCKSAVFAFVFVHFCRSN 743


>Glyma06g46450.1 
          Length = 744

 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 1/148 (0%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           MS +    + F  F S +L +  IS+ VF+IT+K+  ++          R+TFDES VF+
Sbjct: 597 MSRITPMNAGFCAFLSVLLKLFRISETVFDITKKDLPSAKDVGDDKDAGRYTFDESVVFL 656

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNE-CGMGEFISSLYLIVCYWPXXXXXXXXXX 119
            GTT LLVQL A++IK LG  P     SG   CG+GE   S+YLI+CYWP          
Sbjct: 657 PGTTILLVQLTAMVIKLLGFQPPVATQSGKHGCGLGEIFCSVYLIICYWPFLRGLFETGK 716

Query: 120 YGIPFSTICKSAALAFAFVHFCRSTVMG 147
           Y IP STI KSA L   FVH C+ TV G
Sbjct: 717 YRIPLSTILKSAILTCLFVHLCQRTVPG 744


>Glyma12g31800.1 
          Length = 772

 Score =  117 bits (292), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 2/144 (1%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M+ + T  SWF GF + +L    IS+  FEIT+K+ + S          RF F++SPVF+
Sbjct: 631 MARITTMNSWFFGFLAILLKRLRISNIGFEITRKDETFSNEGANENDG-RFIFNKSPVFI 689

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LL+QL AL+  +LG  P    ++G+  G+GE   S YL+VCYWP          Y
Sbjct: 690 PGTTILLIQLTALVTMWLGWQPPV-RNNGHGSGVGEVFCSTYLVVCYWPFLKGLFEKGKY 748

Query: 121 GIPFSTICKSAALAFAFVHFCRST 144
           GIP STICKS ALAF FV+ C++ 
Sbjct: 749 GIPLSTICKSMALAFLFVYLCKAN 772


>Glyma12g31780.1 
          Length = 739

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 5/145 (3%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M  + T TS F GF   +L    ISD VFEIT+K+  +S          RF F++SP+FV
Sbjct: 598 MGRITTMTSCFFGFLDIVLKRLRISDTVFEITKKDQPSSNDENVG----RFIFNKSPIFV 653

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GT  LL+QL AL+I +     +    +    G+GE   S YL++CY P          Y
Sbjct: 654 PGTAILLIQLTALVISWWRWQ-QSLLKNERTYGLGEVFCSAYLVLCYLPLLKGLFAKGKY 712

Query: 121 GIPFSTICKSAALAFAFVHFCRSTV 145
           GIP STICK+  LAF FV  C ++V
Sbjct: 713 GIPLSTICKAMVLAFLFVQLCNASV 737


>Glyma12g10330.1 
          Length = 246

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 72/137 (52%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           MS +    + F  F S +L +  I + VF+I +K+   +          R+TFDES VF+
Sbjct: 110 MSRITPMNAGFCAFLSVLLKLLRIFETVFDIIKKDLPPAEDVGDDKDAGRYTFDESLVFL 169

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LL+QL  + IK LGL P  P  SGN  G+GE   S+YL++CYWP          Y
Sbjct: 170 PGTTILLLQLTTMFIKLLGLQPAVPTPSGNGSGLGEIFCSVYLMICYWPFLRGLFKTRKY 229

Query: 121 GIPFSTICKSAALAFAF 137
            I  STI KS  L   F
Sbjct: 230 RILQSTIFKSVILTSLF 246


>Glyma06g46460.1 
          Length = 132

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 51/90 (56%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           MS +    + F  F S +L    IS+ VF+IT+KE  ++          R+TFDES VF+
Sbjct: 38  MSRITPMNAGFCAFLSFLLKFLRISETVFDITKKELPSAGDVVDDKDVGRYTFDESLVFL 97

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGN 90
            GTT LL+QL  ++IK LGL P     SGN
Sbjct: 98  PGTTILLLQLTIMVIKLLGLQPPLATQSGN 127


>Glyma12g10300.1 
          Length = 759

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           MS + +  + F  F S +L +  IS+ VF++T+K+   +          R+TFDES VF+
Sbjct: 677 MSRITSMNAGFCAFLSVLLKLLRISETVFDVTKKDLPPTGNVLDDKDAGRYTFDESVVFL 736

Query: 61  AGTTFLLVQLAAL 73
            GTT LL+QL A+
Sbjct: 737 PGTTILLLQLTAM 749