Miyakogusa Predicted Gene

Lj0g3v0226459.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0226459.1 tr|D7LZN3|D7LZN3_ARALL Signal-responsive protein
OS=Arabidopsis lyrata subsp. lyrata GN=ATSR PE=4
SV,72.88,1e-18,THREONINE DEHYDRATASE-RELATED,NULL; SER/THR
DEHYDRATASE, TRP SYNTHASE,NULL; no description,NULL,CUFF.14812.1
         (62 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g37930.2                                                       117   2e-27
Glyma05g37930.1                                                       117   2e-27
Glyma08g01670.1                                                       111   2e-25

>Glyma05g37930.2 
          Length = 335

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/60 (91%), Positives = 59/60 (98%)

Query: 1   MKLCFQILKVVVEPSGAIGLAAVLSDSFQKNPAWKDCNNIGIVVSGGNVDLGVLWDSLNK 60
           MKLCF+ILKVVVEPSGAIGLAAVLSD+FQKNPAWKDCN+IGIVVSGGNVDL +LWDSLNK
Sbjct: 274 MKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGIVVSGGNVDLAMLWDSLNK 333


>Glyma05g37930.1 
          Length = 335

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/60 (91%), Positives = 59/60 (98%)

Query: 1   MKLCFQILKVVVEPSGAIGLAAVLSDSFQKNPAWKDCNNIGIVVSGGNVDLGVLWDSLNK 60
           MKLCF+ILKVVVEPSGAIGLAAVLSD+FQKNPAWKDCN+IGIVVSGGNVDL +LWDSLNK
Sbjct: 274 MKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGIVVSGGNVDLAMLWDSLNK 333


>Glyma08g01670.1 
          Length = 318

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 57/60 (95%)

Query: 1   MKLCFQILKVVVEPSGAIGLAAVLSDSFQKNPAWKDCNNIGIVVSGGNVDLGVLWDSLNK 60
           MKL F+ILKVVVEPSGAIGLAA LSD+FQKNPAWKDCN+IGIV+SGGNVDL +LWDSLNK
Sbjct: 257 MKLFFEILKVVVEPSGAIGLAAFLSDTFQKNPAWKDCNHIGIVISGGNVDLALLWDSLNK 316