Miyakogusa Predicted Gene

Lj0g3v0226409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0226409.1 Non Chatacterized Hit- tr|I1HH22|I1HH22_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,77.78,2e-18,Myb_DNA-bind_6,NULL;
Homeodomain-like,Homeodomain-like; SANT  SWI3, ADA2, N-CoR and
TFIIIB'' DNA-bin,CUFF.14807.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g40630.1                                                       169   8e-43
Glyma03g38020.1                                                       165   1e-41

>Glyma19g40630.1 
          Length = 433

 Score =  169 bits (427), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 78/86 (90%), Positives = 83/86 (96%)

Query: 36  GIISFAKYNKSVDIIRYTDEEYDKHLTNPMWTKEETDELFDLCERFDLRFIVIADRFPSS 95
           G  SFAKYNKSVD+I+YTDEEYDK+LT+PMWTKEETD+LFDLCERFDLRFIVIADRFPSS
Sbjct: 99  GDYSFAKYNKSVDVIKYTDEEYDKYLTDPMWTKEETDQLFDLCERFDLRFIVIADRFPSS 158

Query: 96  RTVEELKDRYYSVSRAILIARAPSLG 121
           RTVEELKDRYYSVSRAILIARAPS G
Sbjct: 159 RTVEELKDRYYSVSRAILIARAPSSG 184


>Glyma03g38020.1 
          Length = 433

 Score =  165 bits (417), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/86 (88%), Positives = 82/86 (95%)

Query: 36  GIISFAKYNKSVDIIRYTDEEYDKHLTNPMWTKEETDELFDLCERFDLRFIVIADRFPSS 95
           G  SFAKYNKSVD+I+YTDEEYDK+L++P WTKEETD+LFDLCERFDLRFIVIADRFPSS
Sbjct: 99  GDYSFAKYNKSVDVIKYTDEEYDKYLSDPTWTKEETDQLFDLCERFDLRFIVIADRFPSS 158

Query: 96  RTVEELKDRYYSVSRAILIARAPSLG 121
           RTVEELKDRYYSVSRAILIARAPS G
Sbjct: 159 RTVEELKDRYYSVSRAILIARAPSSG 184