Miyakogusa Predicted Gene

Lj0g3v0225939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225939.1 Non Chatacterized Hit- tr|I3SCE4|I3SCE4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,29.7,0.00000006,
,CUFF.14704.1
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g30640.1                                                        49   1e-06
Glyma19g29500.1                                                        46   9e-06
Glyma09g02410.1                                                        46   1e-05

>Glyma04g30640.1 
          Length = 2354

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 7    FSAEPKDHFHQFCGLFPFVKKNG-LMSIWISVIWHIWMGRNAAVFREGSFTPDDVFELSR 65
            F   PK HF    G+ P   +N      W+++ W IW  RN+ VF    F  + +FE + 
Sbjct: 1474 FPLSPKQHFLHHLGVQPAGGRNNRWFCWWLALTWSIWKLRNSIVFSNAIFDANKLFEEAI 1533

Query: 66   MKSWEWLRAKCSNFLHGTFEWHNEP 90
               W WLR    +F     +W   P
Sbjct: 1534 FLLWSWLRGFEKDFSVHFNQWSTMP 1558


>Glyma19g29500.1 
          Length = 1997

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 7    FSAEPKDHFHQFCGLFPFVKKNGLMS-IWISVIWHIWMGRNAAVFREGSFTPDDVFELSR 65
            FS +PK+HF QF         N     +WI++ + IW  RNA +F+   FTP+ V + + 
Sbjct: 1908 FSLDPKNHFVQFTQWNSKAGTNKRWEFLWIALSFSIWHHRNARIFKNQPFTPEKVMDDAL 1967

Query: 66   MKSWEWLR 73
              +W WL+
Sbjct: 1968 FHTWSWLK 1975


>Glyma09g02410.1 
          Length = 261

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%)

Query: 1   MGVYVVFSAEPKDHFHQFCGLFPF-VKKNGLMSIWISVIWHIWMGRNAAVFREGSFTPDD 59
           + V   F   PK HF    G+ P  V+ N     W+++ W IW  RN+ VF   +F  + 
Sbjct: 160 LQVKGAFPLSPKQHFLHHLGVQPAGVRNNRWHCWWLALTWSIWKLRNSIVFSNANFDANK 219

Query: 60  VFELSRMKSWEWLRAKCSNF 79
           +FE +    W WLR    +F
Sbjct: 220 LFEEAIFLLWSWLRGFEKDF 239