Miyakogusa Predicted Gene

Lj0g3v0225779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225779.1 Non Chatacterized Hit- tr|I1MN82|I1MN82_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56481
PE,63.33,0.000000000000007, ,CUFF.14684.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g24290.1                                                        85   2e-17
Glyma16g24270.1                                                        70   6e-13

>Glyma16g24290.1 
          Length = 488

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 1/60 (1%)

Query: 2  RQGWLISTAASSLFIFLSFAAVSHGLVPPRTLLNRLSEGRYLNSTELWFNNQTLDHFSPY 61
          ++ W+I+TA  SL    SF  +S+G+VPPRTLLN+LSEG+YLN+ ELWF +QTLDHFSPY
Sbjct: 3  QEEWMITTALLSLLFVSSFPPLSYGVVPPRTLLNKLSEGKYLNTQELWF-DQTLDHFSPY 61


>Glyma16g24270.1 
          Length = 490

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/43 (72%), Positives = 37/43 (86%), Gaps = 1/43 (2%)

Query: 19 SFAAVSHGLVPPRTLLNRLSEGRYLNSTELWFNNQTLDHFSPY 61
          SF A+S+G+VPPRTLLN+LS+G YL + E WF NQTLDHFSPY
Sbjct: 23 SFPALSYGVVPPRTLLNKLSQGSYLTTQEQWF-NQTLDHFSPY 64