Miyakogusa Predicted Gene

Lj0g3v0225769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225769.1 Non Chatacterized Hit- tr|D7U3Z2|D7U3Z2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,32,0.000005,seg,NULL,CUFF.14696.1
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08890.1                                                       196   8e-51
Glyma19g00520.1                                                        75   3e-14

>Glyma05g08890.1 
          Length = 617

 Score =  196 bits (499), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 110/132 (83%), Gaps = 3/132 (2%)

Query: 40  LVTIHDSQSKPISSPFYNLLPPTQNPHNIVNLISSLLKQKSFHLSLFQN---DIKGILPH 96
           L+ +HDS SK   SPFYNLLPPTQNP+NIVNLISS+LK KS +LSL  +   DIKGILPH
Sbjct: 9   LIALHDSHSKSTLSPFYNLLPPTQNPNNIVNLISSILKHKSSNLSLLHSSNNDIKGILPH 68

Query: 97  MGTHEISRVLLRCQSDHSSALTFFNWVKNDLGVKPAVQNYCVIVHILAWSRVFSKAMKLL 156
           MG HEISR+LLRCQSDHSS LTFFNWVKNDL + P + NYCVIVHILAWSRVFS AM LL
Sbjct: 69  MGPHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNLL 128

Query: 157 CELIHLVEVEGV 168
            ELI LVEVEGV
Sbjct: 129 SELIQLVEVEGV 140


>Glyma19g00520.1 
          Length = 79

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 3/65 (4%)

Query: 45  DSQSKPISSPFYNLLPPTQNPHNIVNLISSLLKQKSFHLSLFQ---NDIKGILPHMGTHE 101
           DS SKP  SPFY  LPPTQN +NIV+LIS +LK+KS  +SL     N IK ILPH+G HE
Sbjct: 15  DSHSKPTLSPFYKYLPPTQNSNNIVSLISFILKRKSSDISLLHSTNNGIKVILPHLGPHE 74

Query: 102 ISRVL 106
           ISRV+
Sbjct: 75  ISRVM 79