Miyakogusa Predicted Gene

Lj0g3v0224509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0224509.1 Non Chatacterized Hit- tr|B8B0L3|B8B0L3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,51.85,3e-17,FAR1,FAR1 DNA binding domain,CUFF.14608.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11250.1                                                        70   9e-13
Glyma10g38320.1                                                        68   3e-12
Glyma15g23100.1                                                        66   2e-11
Glyma05g06350.1                                                        62   2e-10
Glyma15g10830.1                                                        57   5e-09
Glyma13g28230.1                                                        57   8e-09
Glyma15g03440.1                                                        55   3e-08
Glyma15g03440.3                                                        55   3e-08
Glyma15g03440.2                                                        55   4e-08
Glyma11g13610.2                                                        54   9e-08
Glyma11g13610.1                                                        53   1e-07
Glyma12g05600.1                                                        52   2e-07
Glyma15g34840.1                                                        49   1e-06
Glyma07g11940.1                                                        49   2e-06

>Glyma13g11250.1 
          Length = 469

 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 22/86 (25%)

Query: 65  SNKDDEWKPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNKDGMILTIRYVCSKEG 124
           + ++ +WKP++GL            + YG KIGF VRK++ NK          YVC KEG
Sbjct: 2   TEENGDWKPKIGL------------DKYGEKIGFGVRKKFKNK----------YVCYKEG 39

Query: 125 IRKPDKRDCVTTKHRLETRTNCPARI 150
           IRK DKRD   TKH  ETRTNC  R+
Sbjct: 40  IRKLDKRDGKATKHGTETRTNCFVRV 65


>Glyma10g38320.1 
          Length = 859

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 75  VGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDKRDC 133
           +G  F + +  ++ +N Y   +GFNVRK + N++K  G +++ ++ CSKEG R+ DKRD 
Sbjct: 64  IGTEFESDDHAYQFYNKYARLLGFNVRKDWINRSKVHGQVVSRKFTCSKEGYRRKDKRDA 123

Query: 134 VTTKHRLETRTNCPARI 150
              KHR ETR+ C A +
Sbjct: 124 NVKKHRKETRSGCLAHM 140


>Glyma15g23100.1 
          Length = 659

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 12/72 (16%)

Query: 73  PQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNKDGMILTIRYVCSKEGIRKPDKRD 132
           P++G+ FNT++E  + W  YGG IGF+             +  +R+VC+KE  R+P+KRD
Sbjct: 86  PKLGMEFNTVDEAKRFWTAYGGLIGFDC------------VTNVRFVCAKEVFRRPNKRD 133

Query: 133 CVTTKHRLETRT 144
           C+T   R +TRT
Sbjct: 134 CLTKTSRAKTRT 145


>Glyma05g06350.1 
          Length = 543

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 79  FNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDKRDCVTTK 137
           F++ E  ++ +N Y G +GF+VRK Y N++K DG + + R+ C +EG R  DK+D    +
Sbjct: 3   FDSEEHAYEFYNTYAGHVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRHKDKQDTNVKR 62

Query: 138 HRLETRTNCPARI 150
            R +TR  C A++
Sbjct: 63  PRKDTRIGCLAQL 75


>Glyma15g10830.1 
          Length = 762

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 14/79 (17%)

Query: 73  PQVGLLFNTLEETWKLWNGYGGKIGFNVR-KQYFNKNKDGMILTIRYVCSKEGIRKPDKR 131
           P +GL F+T +E  K +  Y  + GF VR  Q +    DG + + R+VCSKEG       
Sbjct: 29  PYIGLEFDTADEALKFYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEG------- 81

Query: 132 DCVTTKHRLETRTNCPARI 150
                 H+L +RT+CPA I
Sbjct: 82  ------HQLSSRTDCPAFI 94



 Score = 51.6 bits (122), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVR-KQYFNKNKDGMILTIRYVCSKEGIRKPDK 130
           +P VG  F + +E ++ ++ Y   +GF VR  Q F    DG+I + R+VCSKEG + P +
Sbjct: 184 EPYVGQEFISPDEAYQFYHAYAAHLGFGVRIGQLFRSKNDGLITSRRFVCSKEGFQHPLR 243

Query: 131 RDC 133
             C
Sbjct: 244 VGC 246


>Glyma13g28230.1 
          Length = 762

 Score = 57.0 bits (136), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 14/79 (17%)

Query: 73  PQVGLLFNTLEETWKLWNGYGGKIGFNVR-KQYFNKNKDGMILTIRYVCSKEGIRKPDKR 131
           P +GL F+T +E  K +  Y  + GF VR  Q +    DG + + R+VCSKEG       
Sbjct: 29  PYIGLEFDTADEALKYYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEG------- 81

Query: 132 DCVTTKHRLETRTNCPARI 150
                 H+L +RT+CPA I
Sbjct: 82  ------HQLSSRTDCPAFI 94



 Score = 52.4 bits (124), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVR-KQYFNKNKDGMILTIRYVCSKEGIRKPDK 130
           +P VG  F++  E ++ ++ Y   +GF VR  Q F    DG I + R+VCSKEG + P +
Sbjct: 184 EPYVGQEFSSPNEAYQFYHAYAAHLGFGVRIGQLFRSKNDGSITSRRFVCSKEGFQHPSR 243

Query: 131 RDC 133
             C
Sbjct: 244 VGC 246


>Glyma15g03440.1 
          Length = 282

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDK 130
           +P VG  F +       +N Y  ++GF +R    ++++ DG  +    VC++EG R PDK
Sbjct: 103 EPYVGQEFESEAAAHAFYNAYAKRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDK 162

Query: 131 RDCVTTKHRLETRTNCPARI 150
           R+ +  + R ETR  C A I
Sbjct: 163 REKI-VRQRAETRVGCRAMI 181


>Glyma15g03440.3 
          Length = 253

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDK 130
           +P VG  F +       +N Y  ++GF +R    ++++ DG  +    VC++EG R PDK
Sbjct: 74  EPYVGQEFESEAAAHAFYNAYAKRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDK 133

Query: 131 RDCVTTKHRLETRTNCPARI 150
           R+ +  + R ETR  C A I
Sbjct: 134 REKI-VRQRAETRVGCRAMI 152


>Glyma15g03440.2 
          Length = 252

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDK 130
           +P VG  F +       +N Y  ++GF +R    ++++ DG  +    VC++EG R PDK
Sbjct: 73  EPYVGQEFESEAAAHAFYNAYAKRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDK 132

Query: 131 RDCVTTKHRLETRTNCPARI 150
           R+ +  + R ETR  C A I
Sbjct: 133 REKI-VRQRAETRVGCRAMI 151


>Glyma11g13610.2 
          Length = 263

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDK 130
           +P VG  F +       +N Y  ++GF VR    ++++ DG  +    VC+KEG R  DK
Sbjct: 72  EPYVGQEFGSEAAAHAFYNAYATEVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADK 131

Query: 131 RDCVTTKHRLETRTNCPARI 150
           R+ +  + R ETR  C A I
Sbjct: 132 REKI-VRQRAETRVGCRAMI 150


>Glyma11g13610.1 
          Length = 295

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDK 130
           +P VG  F +       +N Y  ++GF VR    ++++ DG  +    VC+KEG R  DK
Sbjct: 104 EPYVGQEFGSEAAAHAFYNAYATEVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADK 163

Query: 131 RDCVTTKHRLETRTNCPARI 150
           R+ +  + R ETR  C A I
Sbjct: 164 REKI-VRQRAETRVGCRAMI 182


>Glyma12g05600.1 
          Length = 263

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 72  KPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEGIRKPDK 130
           +P VG  F +       +N Y   +GF VR    ++++ DG  +    VC+KEG R  DK
Sbjct: 72  EPYVGQEFGSEAAAHAFYNAYATDVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADK 131

Query: 131 RDCVTTKHRLETRTNCPARI 150
           R+ +  + R ETR  C A I
Sbjct: 132 REKI-VRQRAETRVGCRAMI 150


>Glyma15g34840.1 
          Length = 512

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 66  NKDDEWKPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNK-DGMILTIRYVCSKEG 124
           N D   KPQVG+LF + +     +N Y   +GF+     FN+ K DG I+T  + CS+E 
Sbjct: 43  NGDAYRKPQVGMLFESEDAAKSFYNAYARHVGFSTHVGQFNRAKPDGPIITWDFACSREV 102

Query: 125 IRKPDKRDC 133
            ++ +   C
Sbjct: 103 FKRKNIVSC 111


>Glyma07g11940.1 
          Length = 374

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 68  DDEWKPQVGLLFNTLEETWKLWNGYGGKIGFNVRKQYFNKNKDGMILTIRYVCSKEGIRK 127
           D + KP VG +F+TLEE    +  Y  ++GFNV +    K KDG I    Y+CS++G + 
Sbjct: 6   DKQLKPIVGNMFDTLEEGNNFYTTYAVEVGFNVCRSTEVKYKDGEIKFKYYLCSRQGFKA 65

Query: 128 P---------DKRDCVTTKHRLETRTNCPARI 150
                     D++     + R +TR  C A+I
Sbjct: 66  ENRTISAFLVDEKRMPKIRWRKQTREGCNAKI 97