Miyakogusa Predicted Gene

Lj0g3v0224419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0224419.1 Non Chatacterized Hit- tr|G7J740|G7J740_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,26.77,0.00001,seg,NULL,CUFF.14600.1
         (325 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g20800.1                                                        65   8e-11
Glyma05g09370.1                                                        54   2e-07
Glyma15g01400.1                                                        53   4e-07

>Glyma10g20800.1 
          Length = 226

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 6/74 (8%)

Query: 246 LVQKRAAEDELKSGPEK-----RKFSGYDVLKVMAENNAHRSKDEPTLSLLETARLIGIT 300
           +++ R +++E  +G E+      K++ +DVL+V ++NN    ++   LSLL+ A+  G+T
Sbjct: 152 MLKSRRSKNEAATGTERGGNNSEKWNVFDVLRVFSQNNDDVEENHDHLSLLDVAKAHGVT 211

Query: 301 FPRPRWWPKNDDRF 314
           FPRPRWWP +DD+F
Sbjct: 212 FPRPRWWP-DDDKF 224



 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 56/110 (50%), Gaps = 16/110 (14%)

Query: 34  QDVFHTPREDSSLTSSDNQQPTVTVDFGVVHCSVSKV--FDSGTQGFVDLGGFPDESEFM 91
           QDVFHTP EDSSL SSDN         GV  C+V+     D+ +QGFV+   F D S+F+
Sbjct: 40  QDVFHTPPEDSSLHSSDNG--------GVERCAVNLAVDVDAVSQGFVN---FCDGSKFV 88

Query: 92  DLGKDSG-LGFPEAADEISPGSGGDGMGEIPGIQADQFGVSDADAENQVS 140
           D GKDS  LGF E         G   MG   G    +  V+D   +N  S
Sbjct: 89  DSGKDSDFLGFSEVQPTQEKNVGESIMGSSEGKLVSE--VNDISVKNNCS 136


>Glyma05g09370.1 
          Length = 316

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 119/295 (40%), Gaps = 62/295 (21%)

Query: 34  QDVFHTPREDSSLTSSDNQQPTVTVDFGVVHCSVSKVFDSGTQGFVDLGGFPDESEFMDL 93
           +DVFHTP E++SL +S ++           HC V+         F+D+    D   + +L
Sbjct: 61  EDVFHTP-EEASLPTSPSEN----------HCVVN-------YAFIDVD---DVDAWFEL 99

Query: 94  GKDSGLGFPEAADEISPGSGGDGMGEIPGIQADQFGVSDADAENQVSDDADAKNQVSGDA 153
           GKDS LG   ++D       G+ MG +  +  D            +S    A+   S D 
Sbjct: 100 GKDSELG---SSDVHVEEVNGEEMGNLETLSGDV----------SISVSESAEGPKSSDG 146

Query: 154 DAENPSNLDGEQ-MPEDEICIEVSYDEDLGSGKKSETLAAADLGTKACDDIDRDGYLTES 212
             E+P     EQ   +  +  E   D++ G G +     +    T           +TE+
Sbjct: 147 VVESPGKKKSEQGKNKSAVSGEQKTDKEAGPGLRRVLPPSTAASTP----------MTET 196

Query: 213 ETLIYEVTEDSGKRGGSDKATEDSGERGGSDKELVQKRAAEDELKSGPEKRKFSGYDVLK 272
            +          KR   D     +  +  S+ +   +   ED  ++GPE R+     +  
Sbjct: 197 GSGRSGNGGGGAKRKFLDAFF--AAVKAFSELQSTVEELNEDHKEAGPELRRVLPPSITG 254

Query: 273 VMAENNAHRS-------KDEPTL--------SLLETARLIGITFPRPRWWPKNDD 312
             A+  + RS       K E T+        +LL+ AR  G+TFPRPRWWP+ D+
Sbjct: 255 STAKTGSGRSGNGGAFSKLESTVEENNDDHRTLLDVARAKGVTFPRPRWWPEGDN 309


>Glyma15g01400.1 
          Length = 264

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 14/60 (23%)

Query: 261 EKRK-FSGYDVLKVMAE-------NNAHRSKDEPTLSLLETARLIGITFPRPRWWPKNDD 312
           EKRK F  + VLK  +E       NN H       L+LL+ AR  G+TFPRPRWWP+ D+
Sbjct: 205 EKRKAFDVFAVLKAFSELESTVEENNDHH------LTLLDVARARGVTFPRPRWWPEGDN 258