Miyakogusa Predicted Gene

Lj0g3v0223749.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223749.1 Non Chatacterized Hit- tr|I1JL64|I1JL64_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,64.04,6e-18,FAM175PLANT,FAM175 family, plant; PROTEINF175,FAM175
family; seg,NULL,CUFF.14548.1
         (300 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g31570.1                                                       310   1e-84
Glyma03g05690.2                                                       119   3e-27
Glyma03g05690.1                                                        89   6e-18

>Glyma01g31570.1 
          Length = 307

 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 170/294 (57%), Positives = 192/294 (65%), Gaps = 11/294 (3%)

Query: 1   MDDPPLQNIAISGPTLASLIQRFSTAPSAIDGLLFGHVTHVXXXXX---XXXXXXXXXXX 57
           M+DPPLQ IAISGPTLASLIQRFST+PS+I GLLFGHVT +                   
Sbjct: 1   MEDPPLQKIAISGPTLASLIQRFSTSPSSIHGLLFGHVTPLPLTLSDDDTSSAATPTPTL 60

Query: 58  XXXVTGFLSSPSFHDSTGAVNXXXXXXXXXXXXXXXGWFSARRRTPLRPSMREXXXXXXX 117
              VTGFL+SPSFHDS+G V                GWFSARRR+PLRPSMRE       
Sbjct: 61  LATVTGFLTSPSFHDSSGTV-----LPSSLPNSPLLGWFSARRRSPLRPSMREFSVTASL 115

Query: 118 XXXXXXXXPIEN--SPHHRFNXXXXXXXXXXXXXXTSSHVHTHEYRAYQFRRAALSFDAK 175
                    I+N  S    F                 SHVHTHEYRA+QFR AALSF+ +
Sbjct: 116 SSLTQFSSQIQNPNSEPSLFPPCIFLLLASPSSDNHHSHVHTHEYRAFQFRPAALSFEPR 175

Query: 176 SINIVNIGPAFRGHYGSFSPNSPLPALNCRLRGSPMK-GDDGDERLSEMKQAAKDQRELD 234
           S+++VNIGPAFRGHYG+FSPNS LP L+C   GSPM   + GDE L +MKQAAKDQRELD
Sbjct: 176 SLDVVNIGPAFRGHYGAFSPNSNLPPLDCGPHGSPMMMSEGGDEVLGKMKQAAKDQRELD 235

Query: 235 ACVEGFEVGRLSSLMGSEATSYTQGLEDLYQKMLVKIETLTSLVEKSSAKVLEQ 288
            C EGFE+GRLS +MGSEA S T+GLE+LYQKMLVKIE LT LVEKSSA VLEQ
Sbjct: 236 KCAEGFEIGRLSRMMGSEARSCTEGLEELYQKMLVKIENLTGLVEKSSAMVLEQ 289


>Glyma03g05690.2 
          Length = 86

 Score =  119 bits (299), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/78 (71%), Positives = 65/78 (83%)

Query: 211 MKGDDGDERLSEMKQAAKDQRELDACVEGFEVGRLSSLMGSEATSYTQGLEDLYQKMLVK 270
           M  D GDE + +MKQA KDQREL+ C EGFEVGRLS +MGSEA +YT+GLE+LYQKMLVK
Sbjct: 1   MISDGGDETMGKMKQATKDQRELNQCAEGFEVGRLSRMMGSEAKNYTEGLEELYQKMLVK 60

Query: 271 IETLTSLVEKSSAKVLEQ 288
           IE L+ LVEKSSA V+EQ
Sbjct: 61  IENLSGLVEKSSAMVIEQ 78


>Glyma03g05690.1 
          Length = 294

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 53/77 (68%)

Query: 1  MDDPPLQNIAISGPTLASLIQRFSTAPSAIDGLLFGHVTHVXXXXXXXXXXXXXXXXXXX 60
          MDD PLQ IAISGPTLASLIQRFST+PS++ GLLFGHVT +                   
Sbjct: 1  MDDQPLQKIAISGPTLASLIQRFSTSPSSLHGLLFGHVTPLPLTPTTTTTPPPPATLLAI 60

Query: 61 VTGFLSSPSFHDSTGAV 77
          VTGFL+SPSFHDS+G V
Sbjct: 61 VTGFLTSPSFHDSSGTV 77



 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 37/48 (77%)

Query: 249 MGSEATSYTQGLEDLYQKMLVKIETLTSLVEKSSAKVLEQVSFYLFMI 296
           M   A +YT+GLE+LYQKMLVKIE L+ LVEKSSA V+EQ+ + +  I
Sbjct: 238 MRGGAKNYTEGLEELYQKMLVKIENLSGLVEKSSAMVIEQMLYAILNI 285