Miyakogusa Predicted Gene

Lj0g3v0223669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223669.1 Non Chatacterized Hit- tr|C6TEX9|C6TEX9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52573 PE,53.42,0.0001,
,CUFF.14535.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g25250.2                                                        50   4e-07
Glyma02g25250.1                                                        50   4e-07

>Glyma02g25250.2 
          Length = 342

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 41/73 (56%), Gaps = 14/73 (19%)

Query: 1   MNTDLLTGSSQIDYGNETLCSKECGESD-GTAKSSFGESSQEGGLHELSR------RHSG 53
           MNTDLLTGSSQID        KE   SD  T K+   ESSQE GL   SR        S 
Sbjct: 271 MNTDLLTGSSQID-------DKETRYSDQDTTKAFINESSQEAGLPASSRSSTNDKLQSC 323

Query: 54  LKKVSFVSIKNPT 66
            KKV+FVSIKN T
Sbjct: 324 PKKVAFVSIKNLT 336


>Glyma02g25250.1 
          Length = 342

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 41/73 (56%), Gaps = 14/73 (19%)

Query: 1   MNTDLLTGSSQIDYGNETLCSKECGESD-GTAKSSFGESSQEGGLHELSR------RHSG 53
           MNTDLLTGSSQID        KE   SD  T K+   ESSQE GL   SR        S 
Sbjct: 271 MNTDLLTGSSQID-------DKETRYSDQDTTKAFINESSQEAGLPASSRSSTNDKLQSC 323

Query: 54  LKKVSFVSIKNPT 66
            KKV+FVSIKN T
Sbjct: 324 PKKVAFVSIKNLT 336