Miyakogusa Predicted Gene

Lj0g3v0223199.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223199.3 tr|A4RUK5|A4RUK5_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_30653,34.48,2e-18,Pseudouridine synthase,Pseudouridine
synthase, catalytic domain; SUBFAMILY NOT NAMED,NULL; RNA
PSEUD,CUFF.15297.3
         (289 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27660.1                                                       405   e-113
Glyma15g11300.1                                                       364   e-101

>Glyma13g27660.1 
          Length = 473

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/268 (75%), Positives = 218/268 (81%), Gaps = 5/268 (1%)

Query: 1   MLFSGGCRSFTAPAVSRALR---NSLTKHLNKHALXXXXXXXXXXXNAALAGETESSTTD 57
           MLF+GGCR    PA +RA+R    +L+ H NKHA            N ALAGE E STTD
Sbjct: 6   MLFAGGCRILAVPAAARAIRIPRAALSSHHNKHA-PSWGCRSSHNSNTALAGEAEFSTTD 64

Query: 58  AGNLXXXXXXXXXXXXXDRLLPCPLHKSPPRIEHLVVSEGGPVLEYICRSLDLHPLFVED 117
           AGNL             DRLLPCP HK+PPRIEHLV+SEGGPVLE IC++LDL PL+V D
Sbjct: 65  AGNLTATSSSDSFPKY-DRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSD 123

Query: 118 LIQFGAVYYALVCPHPPPNATPEQLRIFKEVTEPSVLRKRPSIKGKTFREAQKTFRITHA 177
           LIQFGAVYYALVCP PPPNAT EQ+R+FKEVTEPSVLRKR SIKGKT REAQKTFR+TH 
Sbjct: 124 LIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHV 183

Query: 178 NQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC 237
           +QFVEPGTYLRVHVHPKRFPR YEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC
Sbjct: 184 DQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESC 243

Query: 238 VTFATRALGLTTPLLTTHQIDNCTEGCL 265
            TFATRALG+TTPL+TTHQIDNCTEGC+
Sbjct: 244 ATFATRALGMTTPLMTTHQIDNCTEGCV 271


>Glyma15g11300.1 
          Length = 451

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/215 (81%), Positives = 188/215 (87%), Gaps = 1/215 (0%)

Query: 51  TESSTTDAGNLXXXXXXXXXXXXXDRLLPCPLHKSPPRIEHLVVSEGGPVLEYICRSLDL 110
           TE  TTDAG L             DRLLPCP HK+PPRIEHLVVSEGGPVLE+IC++LDL
Sbjct: 36  TEFLTTDAGILNATSSSDSFRKY-DRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDL 94

Query: 111 HPLFVEDLIQFGAVYYALVCPHPPPNATPEQLRIFKEVTEPSVLRKRPSIKGKTFREAQK 170
            PL+V DLIQFGAVYYALVCP PPPNAT EQ+R+FKEVTEPSVLRKR SIKGKT REAQK
Sbjct: 95  PPLYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQK 154

Query: 171 TFRITHANQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVAESYVVLDKPAGTSVGGTT 230
           TFR+TH +QFVEPGTYLRVHVHPKR PRCYEIDWRSRII VAESYVVLDKPAGTSVGGTT
Sbjct: 155 TFRVTHVDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTT 214

Query: 231 DNIEESCVTFATRALGLTTPLLTTHQIDNCTEGCL 265
           DNIEESC TFATRALG+TTPL+TTHQIDNCTEGC+
Sbjct: 215 DNIEESCATFATRALGMTTPLMTTHQIDNCTEGCV 249