Miyakogusa Predicted Gene
- Lj0g3v0223199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0223199.1 Non Chatacterized Hit- tr|E1Z2G6|E1Z2G6_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,37.5,0.0000000002,SUBFAMILY NOT NAMED,NULL; RNA
PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN,NULL; Pseudouridine
synthase,P,CUFF.15297.1
(161 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g27660.1 311 1e-85
Glyma15g11300.1 308 1e-84
>Glyma13g27660.1
Length = 473
Score = 311 bits (798), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 140/161 (86%), Positives = 151/161 (93%)
Query: 1 MRPVNTAPRLISEDFIKGWHRCQLEVLECRKVPWPTTVIQDKYCVEDCGWPSQDHAYECI 60
MRP+N APRLISEDFIKGWH CQLEVLECRK+PWPTT IQDKYCVEDCGWPSQD+AYEC
Sbjct: 313 MRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECK 372
Query: 61 INLLTGKTHQIRAQFSACKAPLIGDSMYMPAAMAEISNPGLNPFGKYKKDFSIESEEEIA 120
INLLTGKTHQIRAQF+A KAPLIGDSMYMPAA+A++SNPGLNPFGKYKKDFS ESE+E A
Sbjct: 373 INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETA 432
Query: 121 VINWIAQHGKEPSVVIGLQACQISWDDKEHFYQAGSPWWRC 161
V+NW+AQHGKEPSV IGLQACQISWDD EHFY+AG PWWRC
Sbjct: 433 VVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWRC 473
>Glyma15g11300.1
Length = 451
Score = 308 bits (789), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 149/161 (92%)
Query: 1 MRPVNTAPRLISEDFIKGWHRCQLEVLECRKVPWPTTVIQDKYCVEDCGWPSQDHAYECI 60
MRP++ APRLISEDFIKGWH CQLEVLECRKVPWP T IQDKYC+EDCGWPSQD+AYEC
Sbjct: 291 MRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYECK 350
Query: 61 INLLTGKTHQIRAQFSACKAPLIGDSMYMPAAMAEISNPGLNPFGKYKKDFSIESEEEIA 120
INLLTGKTHQIRAQF+A KAPLIGDSMYMPAA+A +SNPGLNPFGKYKKDFS ESE+E A
Sbjct: 351 INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKETA 410
Query: 121 VINWIAQHGKEPSVVIGLQACQISWDDKEHFYQAGSPWWRC 161
V+NWIAQHGKEPSV IGLQACQISWDD EHFY+A SPWWRC
Sbjct: 411 VVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWRC 451