Miyakogusa Predicted Gene

Lj0g3v0223169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223169.1 Non Chatacterized Hit- tr|I1JCY5|I1JCY5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50.45,1e-17,seg,NULL,CUFF.14486.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g07210.1                                                        67   4e-12
Glyma16g26160.1                                                        62   2e-10
Glyma16g26160.2                                                        62   2e-10
Glyma16g05700.1                                                        57   4e-09

>Glyma02g07210.1 
          Length = 554

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 54/111 (48%), Gaps = 10/111 (9%)

Query: 1   MRYAXXXXXXVPLKPLLVFCGVFVTGXXXXXXXXXXXDFEFRASN-------NGSSSKDM 53
           MRY       + LKPL V C V VTG                A           S+    
Sbjct: 1   MRYGGGKRRSLSLKPLFVLC-VVVTGLGLLVLSLRPLMLPLVAPCLSRELLLRSSTLFPT 59

Query: 54  AAASWRAAD--TTVKKPCLTVEEMGKDFRRGVGKESLRVRTIIQKHFVANG 102
              +W+A+      ++PC TVEEMG+DF  GVGKESLRVR IIQ HF+ANG
Sbjct: 60  MGRAWKASGGRHVGERPCKTVEEMGEDFGGGVGKESLRVRRIIQNHFLANG 110


>Glyma16g26160.1 
          Length = 574

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 54/120 (45%), Gaps = 24/120 (20%)

Query: 1   MRYAXXXXXXVPLKPLLVFCGVFVTGXXXXXXXXXXXDFEFRAS---------------- 44
           MRY       V LKP  V C V VTG           D    ++                
Sbjct: 1   MRYGGGKRRRVALKPFFVLC-VSVTGFGLLVLSLRLLDAPASSTVPLSRASSSSSEFNTS 59

Query: 45  -NNGSSSKDMAAASWRAADTTVKKPCLTVEEMGKDFRRGVG-KESLRVRTIIQKHFVANG 102
             NGS  K + A          +KPC TVEEMG+DF  GVG KESLRVR +IQ HF+ANG
Sbjct: 60  SKNGSRVKGVVAVR-----RVGEKPCKTVEEMGEDFTSGVGKKESLRVRRMIQNHFLANG 114


>Glyma16g26160.2 
          Length = 551

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 54/120 (45%), Gaps = 24/120 (20%)

Query: 1   MRYAXXXXXXVPLKPLLVFCGVFVTGXXXXXXXXXXXDFEFRAS---------------- 44
           MRY       V LKP  V C V VTG           D    ++                
Sbjct: 1   MRYGGGKRRRVALKPFFVLC-VSVTGFGLLVLSLRLLDAPASSTVPLSRASSSSSEFNTS 59

Query: 45  -NNGSSSKDMAAASWRAADTTVKKPCLTVEEMGKDFRRGVG-KESLRVRTIIQKHFVANG 102
             NGS  K + A          +KPC TVEEMG+DF  GVG KESLRVR +IQ HF+ANG
Sbjct: 60  SKNGSRVKGVVAVR-----RVGEKPCKTVEEMGEDFTSGVGKKESLRVRRMIQNHFLANG 114


>Glyma16g05700.1 
          Length = 538

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 49/109 (44%), Gaps = 16/109 (14%)

Query: 1   MRYAXXXXXXVPLKPLLVFCGVFVTGXXXXXXXX------XXXDFEFRASNNGSSSKDMA 54
           MRY       + L+P LV C   VTG                 DF  +     S+S  + 
Sbjct: 1   MRYGGGRKRRMLLQPFLVLCAT-VTGLGLFMLALRPLDPPITVDFPKKIELGDSNSSSLN 59

Query: 55  AASWRAADTTVKKPCLTVEEMGKDFRRG-VGKESLRVRTIIQKHFVANG 102
                      +KPC  VEEMGKDF  G VGKE+LRVR II+ HF  NG
Sbjct: 60  GGG--------EKPCAAVEEMGKDFEAGVVGKETLRVRRIIEDHFDLNG 100