Miyakogusa Predicted Gene

Lj0g3v0222379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0222379.1 Non Chatacterized Hit- tr|I1N0C9|I1N0C9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,34.69,4e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
seg,NULL,CUFF.14467.1
         (410 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08990.1                                                       121   2e-27
Glyma18g08980.1                                                        97   4e-20
Glyma16g19420.1                                                        93   5e-19
Glyma20g16760.1                                                        77   4e-14
Glyma08g43880.2                                                        76   5e-14
Glyma08g43880.3                                                        76   6e-14
Glyma08g43880.1                                                        75   1e-13

>Glyma18g08990.1 
          Length = 384

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 2/172 (1%)

Query: 230 KIMILPEADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSE 289
           K ++  +  GF   R     I  I+ S + +  PSWKKI    RD WF+ F  KF+    
Sbjct: 93  KPILCLDGQGFLPSRPAANGITDILTSHYIDPWPSWKKIPISSRDSWFEEFLIKFSISPP 152

Query: 290 HDDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESSSFKEKSEINK 349
             +  ++NFE RGS+ +T  +   R  +DK PNWIK+  W  +  +W S  FK+KS   K
Sbjct: 153 DYNWAKKNFEMRGSILLTNKLNKARTTMDK-PNWIKDSVWEILCDHWRSEGFKKKSAQAK 211

Query: 350 RNHAALAGASLHTGGSVPHRLHWKRMMEEKGTNPSLADFYCRTHRKKDHSWV 401
            N A+  GAS HTGGS+    H   MM+E GT P+  + + R H++KD++WV
Sbjct: 212 TNRASNCGAS-HTGGSISASQHRANMMKETGTTPTPLELFRRMHQRKDNTWV 262


>Glyma18g08980.1 
          Length = 356

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 92/194 (47%), Gaps = 17/194 (8%)

Query: 231 IMILPEADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSEH 290
           I+ L E  GF   R     I  I++  F +  PSWKKI    R+ WF+ F   F+     
Sbjct: 96  ILYLDE-QGFLPSRSAANGIGDILKRNFTDPWPSWKKIPISTRNSWFEEFLENFSVSPPD 154

Query: 291 DDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESSSFKEKSEINKR 350
            +  ++NFE RGSV M   +   R  +DK P+WIK+  W ++  +W S  FK+KS   K 
Sbjct: 155 YNWAKKNFEMRGSVLMKNYLNKARTTMDK-PHWIKDVVWERLCEHWTSEGFKKKSTQAKT 213

Query: 351 NHAALAGASLHTGGSVP---HRLHW-----------KRMMEEKGTNPSLADFYCRTHRKK 396
           N A+  GAS HTGGS+    HR +            KR + E   +PS  D +C   R K
Sbjct: 214 NRASNYGAS-HTGGSISASQHRANMEAFARTLKHMTKRALAEGKPSPSELDVWCDVARSK 272

Query: 397 DHSWVGTLAKSAYV 410
                G   KS  +
Sbjct: 273 KGKVYGLGMKSTVM 286


>Glyma16g19420.1 
          Length = 118

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/56 (76%), Positives = 49/56 (87%), Gaps = 1/56 (1%)

Query: 355 LAGASLHTGGSVPHRLHWKRMMEEKGTNPSLADFYCRTH-RKKDHSWVGTLAKSAY 409
           + GASLHTGGS+PHRLHWKRM EEKGT+PSLA+FY RTH RKKD SWVG  A+S+Y
Sbjct: 1   MDGASLHTGGSIPHRLHWKRMKEEKGTDPSLAEFYFRTHRRKKDQSWVGPRAESSY 56


>Glyma20g16760.1 
          Length = 369

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 4/182 (2%)

Query: 230 KIMILPEADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSE 289
           +++I P   G+  +R  ++ +   IRS F+     ++ + +  +  W+  FK++ TW ++
Sbjct: 58  RVIIEPLGIGWTPNRHAVKALGLAIRSHFEGPYHHYEAVPEDVQVRWWTEFKTRVTWTAQ 117

Query: 290 HDDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESS-SFKEKSEIN 348
            +  +++ +E +   +++ ++   R    KRP+WI E  W  +  YW +   FK++   N
Sbjct: 118 DEWQIKKVYETKVKKRLSDMLTKARDKR-KRPHWIGEQAWVDLLIYWVTDKKFKDQCAQN 176

Query: 349 KRNHAALAGASLHTGGSVPHRLHWKRMMEEKGTNPSLAD-FYCRTHRKKDHSWVGTLAKS 407
           K N  +  G ++HT G   H L     +E K   P   D  +  TH+ KD  WV   A+ 
Sbjct: 177 KINRTSSRGGAVHTTGRKSH-LDIAVGLERKYGKPVDPDVLFLATHKNKDGRWVDDRARD 235

Query: 408 AY 409
            Y
Sbjct: 236 TY 237


>Glyma08g43880.2 
          Length = 363

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 26/172 (15%)

Query: 230 KIMILPEADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSE 289
           K +I     GF   R V   I  I++S + +   SWKKI    RD+W   F  KF+    
Sbjct: 210 KPIIYLSGQGFLPSRPVANEIGDILKSHYTDPWSSWKKIPIITRDLWLGEFLRKFSICPP 269

Query: 290 HDDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESSSFKEKSEINK 349
             +  ++NFE +G+  M  ++ + R  ++K PNW+K+  W ++  +W+S   K+KS    
Sbjct: 270 DYNWAKKNFEIQGAAMMKNILNEARTTMNK-PNWVKDDVWERLCEHWKSEELKKKST--- 325

Query: 350 RNHAALAGASLHTGGSVPHRLHWKRMMEEKGTNPSLADFYCRTHRKKDHSWV 401
                                    M +E GT P+  D +   H+  D++WV
Sbjct: 326 ----------------------QANMSKETGTLPTPLDLFRLKHQLSDNTWV 355


>Glyma08g43880.3 
          Length = 373

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 26/172 (15%)

Query: 230 KIMILPEADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSE 289
           K +I     GF   R V   I  I++S + +   SWKKI    RD+W   F  KF+    
Sbjct: 210 KPIIYLSGQGFLPSRPVANEIGDILKSHYTDPWSSWKKIPIITRDLWLGEFLRKFSICPP 269

Query: 290 HDDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESSSFKEKSEINK 349
             +  ++NFE +G+  M  ++ + R  ++K PNW+K+  W ++  +W+S   K+KS    
Sbjct: 270 DYNWAKKNFEIQGAAMMKNILNEARTTMNK-PNWVKDDVWERLCEHWKSEELKKKST--- 325

Query: 350 RNHAALAGASLHTGGSVPHRLHWKRMMEEKGTNPSLADFYCRTHRKKDHSWV 401
                                    M +E GT P+  D +   H+  D++WV
Sbjct: 326 ----------------------QANMSKETGTLPTPLDLFRLKHQLSDNTWV 355


>Glyma08g43880.1 
          Length = 476

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 26/172 (15%)

Query: 230 KIMILPEADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSE 289
           K +I     GF   R V   I  I++S + +   SWKKI    RD+W   F  KF+    
Sbjct: 210 KPIIYLSGQGFLPSRPVANEIGDILKSHYTDPWSSWKKIPIITRDLWLGEFLRKFSICPP 269

Query: 290 HDDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESSSFKEKSEINK 349
             +  ++NFE +G+  M  ++ + R  ++K PNW+K+  W ++  +W+S   K+KS    
Sbjct: 270 DYNWAKKNFEIQGAAMMKNILNEARTTMNK-PNWVKDDVWERLCEHWKSEELKKKST--- 325

Query: 350 RNHAALAGASLHTGGSVPHRLHWKRMMEEKGTNPSLADFYCRTHRKKDHSWV 401
                                    M +E GT P+  D +   H+  D++WV
Sbjct: 326 ----------------------QANMSKETGTLPTPLDLFRLKHQLSDNTWV 355