Miyakogusa Predicted Gene

Lj0g3v0222169.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0222169.1 Non Chatacterized Hit- tr|F6H8U6|F6H8U6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.94,0.000005,seg,NULL,CUFF.14439.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g19420.1                                                        55   2e-08

>Glyma07g19420.1 
          Length = 709

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 66/158 (41%), Gaps = 67/158 (42%)

Query: 29  PTPILTPKLEPLDEWVTT--------TQDPTRTDFSNGT----HQFNLNFFADETLAASI 76
           P PIL PKLEP DE + T        +QDP+   FSNG+       +L    DET  A  
Sbjct: 29  PNPILIPKLEPFDELLNTHTPQQQQQSQDPS---FSNGSLDLDLDLDLKLVCDETPGA-- 83

Query: 77  XXXXXXXXXXXXSLYSDFNRVTDLFRTAFT----------TGLQQCQND----------- 115
                       SL SDFNR++ LF+TAFT           GLQQ QND           
Sbjct: 84  -------FSGDPSLLSDFNRLSQLFKTAFTNNNAVLDPIAQGLQQLQNDAVSDPLDGTTV 136

Query: 116 ----------------------DVSDPNSRAIVPVPAE 131
                                  VSDP+SRAIVPVP E
Sbjct: 137 VPPQSFQNSDPGMQQQQQYPNGAVSDPDSRAIVPVPEE 174