Miyakogusa Predicted Gene

Lj0g3v0221809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0221809.1 Non Chatacterized Hit- tr|B9SFZ8|B9SFZ8_RICCO
Exonuclease, putative OS=Ricinus communis
GN=RCOM_1153,34.48,0.007,coiled-coil,NULL,CUFF.14396.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g18400.1                                                       125   9e-30

>Glyma17g18400.1 
          Length = 509

 Score =  125 bits (315), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 83/107 (77%), Gaps = 3/107 (2%)

Query: 2   FQQSTGMTVSLFVRKMTADEPDNLLPSKRALQVDEADEAVNASKKAKTVPQIEEDALIGS 61
           F+ STG++V+LFVRKM  +EP++  PSKRALQ++EA   V+ SKKAK  P+IEEDA  G 
Sbjct: 396 FRLSTGLSVNLFVRKMVTEEPNDQTPSKRALQINEA---VDVSKKAKMDPKIEEDASAGF 452

Query: 62  TKGDTCTHLKGIEALNQQLKQKDLEIESLREQLRKRDFEVSKLHIMI 108
            KGDT  H K IEALNQQLKQ ++ IESLR+QL ++DFE+S LH MI
Sbjct: 453 GKGDTDAHSKEIEALNQQLKQSEMVIESLRKQLTQKDFEISMLHKMI 499