Miyakogusa Predicted Gene

Lj0g3v0221799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0221799.1 Non Chatacterized Hit- tr|B9SFZ8|B9SFZ8_RICCO
Exonuclease, putative OS=Ricinus communis GN=RCOM_1153,53.85,2e-19,
,CUFF.14394.1
         (95 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g18400.1                                                       144   3e-35
Glyma10g08050.1                                                        99   9e-22
Glyma16g21170.1                                                        79   7e-16

>Glyma17g18400.1 
          Length = 509

 Score =  144 bits (362), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/95 (72%), Positives = 78/95 (82%)

Query: 1   MKLVLARIKHGVDKEFPFTLVQEHVSESDMTKLLLHGIPTSVNIETLHKIVPGDFTIEVK 60
           M LVLA+IKHGVDKEFP  LVQEHV ES++ KLLLH IP +VNIETLHKI+PG+F IE+K
Sbjct: 290 MDLVLAKIKHGVDKEFPIALVQEHVPESELAKLLLHKIPNTVNIETLHKILPGNFKIELK 349

Query: 61  PSRKGQRAKYSALATFKNQQEAYEAYENVQGSQTK 95
           PSRKGQ A YSA A F++  EA  AYENVQGSQ K
Sbjct: 350 PSRKGQGANYSAFAIFRSPPEADGAYENVQGSQLK 384


>Glyma10g08050.1 
          Length = 302

 Score = 99.4 bits (246), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 46/60 (76%), Positives = 53/60 (88%)

Query: 1   MKLVLARIKHGVDKEFPFTLVQEHVSESDMTKLLLHGIPTSVNIETLHKIVPGDFTIEVK 60
           M LVLA+IKHGVDKEFP  LVQEHVS+S++ KLLLH IP +VNIETLHKI+PGDF IE+K
Sbjct: 210 MDLVLAKIKHGVDKEFPIALVQEHVSKSELAKLLLHKIPNTVNIETLHKILPGDFKIELK 269


>Glyma16g21170.1 
          Length = 307

 Score = 79.3 bits (194), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/63 (63%), Positives = 47/63 (74%)

Query: 1   MKLVLARIKHGVDKEFPFTLVQEHVSESDMTKLLLHGIPTSVNIETLHKIVPGDFTIEVK 60
           M L L +I+H VD EFP  LVQEHV ES+M++LL H IP +VN ETLHKIV GDF IE+K
Sbjct: 233 MGLFLVKIEHVVDIEFPILLVQEHVLESEMSRLLRHKIPNTVNNETLHKIVLGDFKIELK 292

Query: 61  PSR 63
             R
Sbjct: 293 VVR 295