Miyakogusa Predicted Gene

Lj0g3v0219899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0219899.1 Non Chatacterized Hit- tr|D7SKB9|D7SKB9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.42,4e-18,seg,NULL,CUFF.14223.1
         (186 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g41350.1                                                        70   2e-12
Glyma15g04050.1                                                        67   1e-11

>Glyma13g41350.1 
          Length = 165

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 114 ISALFFVAFIGLSVITFGVVYLGVKDFLQXXXXX--XXXXXXXXXXXXXXXXXVVRARAG 171
           +SALFF+AF+GLS IT GVVYL V DFLQ                        V RARAG
Sbjct: 92  VSALFFIAFVGLSAITIGVVYLAVTDFLQKRETDKFEKEEAAKGKNKNKKKKKVGRARAG 151

Query: 172 PKGFGQKIDKDEDD 185
           P+GFGQK+ +D+DD
Sbjct: 152 PRGFGQKVVEDDDD 165


>Glyma15g04050.1 
          Length = 154

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 43/73 (58%)

Query: 114 ISALFFVAFIGLSVITFGVVYLGVKDFLQXXXXXXXXXXXXXXXXXXXXXXVVRARAGPK 173
           +SALFF+AF+GLS IT GV+YL V DFLQ                      V RARAGP+
Sbjct: 82  VSALFFIAFVGLSAITIGVIYLAVTDFLQKREKEKFEKEEAAKGKNKKRKKVGRARAGPR 141

Query: 174 GFGQKIDKDEDDD 186
           GFGQK  +DE D+
Sbjct: 142 GFGQKYVEDEVDE 154