Miyakogusa Predicted Gene

Lj0g3v0219829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0219829.1 tr|D7L8S1|D7L8S1_ARALL Peptidoglycan-binding LysM
domain-containing protein OS=Arabidopsis lyrata su,36.27,2e-18,no
description,NULL; LysM domain,NULL; Lysin motif,Peptidoglycan-binding
Lysin subgroup; seg,NULL; L,CUFF.14224.1
         (289 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42930.1                                                       375   e-104
Glyma06g11820.1                                                       370   e-102
Glyma04g42930.2                                                       318   4e-87
Glyma13g03180.1                                                       251   6e-67
Glyma08g04560.1                                                       154   1e-37
Glyma12g11440.1                                                       127   2e-29
Glyma13g39970.1                                                       125   6e-29
Glyma08g23880.1                                                       118   7e-27
Glyma12g30720.1                                                       117   1e-26
Glyma12g30820.1                                                       113   2e-25
Glyma18g06900.1                                                       105   5e-23
Glyma05g26420.1                                                        94   1e-19
Glyma05g35160.1                                                        92   9e-19

>Glyma04g42930.1 
          Length = 417

 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/242 (78%), Positives = 207/242 (85%), Gaps = 3/242 (1%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S +DPSVLDVGQ+LVVPLPCTCFNGSDNSLPAIYLSYVV+PVD+LAAIAARY TTLTDLM
Sbjct: 138 SISDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAIAARYFTTLTDLM 197

Query: 69  NVNAMGSTAISDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNL 128
           NVNAMGSTAI+DGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGP+NL
Sbjct: 198 NVNAMGSTAINDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPKNL 257

Query: 129 NLYCMPTSLSASCSSMQCKNSNLMLGNVTAQQSSAGCNVSSCSYDGLVNGTIATTLSASL 188
           +LYCMP SL+ SCSSMQC+ SNLMLGNVT QQ+S GCNV+SC+YDG+VNG+I TTLS SL
Sbjct: 258 DLYCMPASLAVSCSSMQCRGSNLMLGNVTVQQTSGGCNVTSCNYDGIVNGSIVTTLSPSL 317

Query: 189 QPRCPGLQEFPPLVAPPTSVEKDPTFA-XXXXXXXXXXXXXXXXXXXKSSGMPGLPGFSP 247
           QPRCPGLQEFPPLVAPPT+V +D  FA                     S+G+PG  GFSP
Sbjct: 318 QPRCPGLQEFPPLVAPPTTVARDTVFAPAPAPLFDGAGPASPKSSLVPSAGLPG--GFSP 375

Query: 248 AN 249
           AN
Sbjct: 376 AN 377


>Glyma06g11820.1 
          Length = 401

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/242 (76%), Positives = 207/242 (85%), Gaps = 3/242 (1%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S +DPSVLDVGQ+LVVPLPCTCFNGSDNSLPAIYLSYVV+PVD+LAA+AARY TTLTDLM
Sbjct: 122 SLSDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAVAARYFTTLTDLM 181

Query: 69  NVNAMGSTAISDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNL 128
           NVNAMGSTAI+DGDILAVPIPACASNFPKSASDFG+LVPNGSYAITAGHCVQCSCGP+NL
Sbjct: 182 NVNAMGSTAINDGDILAVPIPACASNFPKSASDFGMLVPNGSYAITAGHCVQCSCGPKNL 241

Query: 129 NLYCMPTSLSASCSSMQCKNSNLMLGNVTAQQSSAGCNVSSCSYDGLVNGTIATTLSASL 188
           +LYCMP SL+ SCSSMQC+ SNLMLGNVT QQ+S GCNV++C+YDG+VNG+I TTLS SL
Sbjct: 242 DLYCMPASLAVSCSSMQCRGSNLMLGNVTVQQTSGGCNVTACNYDGIVNGSIVTTLSPSL 301

Query: 189 QPRCPGLQEFPPLVAPPTSVEKDPTFA-XXXXXXXXXXXXXXXXXXXKSSGMPGLPGFSP 247
           QP+CPGLQEFPPLVAPPT+V +D  FA                     S+G+PG  GFSP
Sbjct: 302 QPQCPGLQEFPPLVAPPTTVARDTVFAPAPAPLFDGDGPASPKSSLVPSTGLPG--GFSP 359

Query: 248 AN 249
           AN
Sbjct: 360 AN 361


>Glyma04g42930.2 
          Length = 329

 Score =  318 bits (815), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 153/175 (87%), Positives = 167/175 (95%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S +DPSVLDVGQ+LVVPLPCTCFNGSDNSLPAIYLSYVV+PVD+LAAIAARY TTLTDLM
Sbjct: 138 SISDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAIAARYFTTLTDLM 197

Query: 69  NVNAMGSTAISDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNL 128
           NVNAMGSTAI+DGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGP+NL
Sbjct: 198 NVNAMGSTAINDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPKNL 257

Query: 129 NLYCMPTSLSASCSSMQCKNSNLMLGNVTAQQSSAGCNVSSCSYDGLVNGTIATT 183
           +LYCMP SL+ SCSSMQC+ SNLMLGNVT QQ+S GCNV+SC+YDG+VNG+I TT
Sbjct: 258 DLYCMPASLAVSCSSMQCRGSNLMLGNVTVQQTSGGCNVTSCNYDGIVNGSIVTT 312


>Glyma13g03180.1 
          Length = 408

 Score =  251 bits (641), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 130/184 (70%), Positives = 144/184 (78%), Gaps = 16/184 (8%)

Query: 12  DPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLMNVN 71
           DPSVLDVG +LVVPLPCTCFN SDNSLP+IYLSYVVQP+D+LAAIAARY TT TDLMNVN
Sbjct: 147 DPSVLDVGLNLVVPLPCTCFNESDNSLPSIYLSYVVQPIDTLAAIAARYFTTFTDLMNVN 206

Query: 72  AMGSTAISDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLY 131
            MG+TAISDGDIL VPIPACASNFPK ASD+GLLVPNGSY I                L 
Sbjct: 207 DMGTTAISDGDILVVPIPACASNFPKYASDYGLLVPNGSYTIL---------------LL 251

Query: 132 CMPTSLSASCS-SMQCKNSNLMLGNVTAQQSSAGCNVSSCSYDGLVNGTIATTLSASLQP 190
                L  +CS  M+CKNSNLMLGNVT Q+SS+GCNV+SC+YDG V+GT  T+LS SLQP
Sbjct: 252 VTNNDLLLTCSFGMRCKNSNLMLGNVTVQRSSSGCNVTSCNYDGFVSGTTITSLSPSLQP 311

Query: 191 RCPG 194
           RCP 
Sbjct: 312 RCPA 315


>Glyma08g04560.1 
          Length = 396

 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)

Query: 21  SLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLMNVNAMGSTAISD 80
           +LV+PLPCTCF+  +N   AIY+SYVVQ  +SL +IA ++ TT++DL  VN  G   +  
Sbjct: 154 TLVIPLPCTCFDNVNNGGNAIYMSYVVQRRESLGSIATKFGTTVSDLETVNGFGEATVDP 213

Query: 81  GDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPTSLSAS 140
           GDIL++PI AC+S    +  D  ++VPNGSY +TA +C++C+C P ++ L C+P+ L   
Sbjct: 214 GDILSIPIAACSSA-TLNWYDESMIVPNGSYTLTATNCIKCTCEPTDITLQCVPSGLDVP 272

Query: 141 CSSMQCKNSNLMLGNVTAQQSSAGCNVSSCSYDGLVNGTIATTLSASLQPRCP 193
           C +++CK SNL++G+     S   CNVS C Y G   G I +++  S    CP
Sbjct: 273 CYNLRCKGSNLIIGDQCVDLSQTACNVSQCVYRGHRGGKILSSMKKSSYLECP 325


>Glyma12g11440.1 
          Length = 217

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/95 (70%), Positives = 74/95 (77%), Gaps = 6/95 (6%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S  DPSVLDVGQ+LV+PLPCTCFN SDNSLPAIYLSYVV+ VD+LAAIAARY T     M
Sbjct: 85  SIFDPSVLDVGQNLVIPLPCTCFNSSDNSLPAIYLSYVVRLVDTLAAIAARYFT-----M 139

Query: 69  NVNAMGSTAISDGDILAVPIPACASNFPKSASDFG 103
           NVNAMGSTAI+D DIL VPIP     + K + DF 
Sbjct: 140 NVNAMGSTAINDDDILTVPIPG-GFFYTKGSKDFN 173


>Glyma13g39970.1 
          Length = 158

 Score =  125 bits (314), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/76 (81%), Positives = 70/76 (92%), Gaps = 1/76 (1%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S +DPS+LDVGQ+LVVPLPCTCFNGSDNSLPAIYLSYVV+ V++L A+AARY TTLTDLM
Sbjct: 83  SISDPSILDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRLVNTLTAVAARYFTTLTDLM 142

Query: 69  NVNAMGSTAISDGDIL 84
           NVNAMGS AI +GDIL
Sbjct: 143 NVNAMGSIAI-NGDIL 157


>Glyma08g23880.1 
          Length = 124

 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 65/76 (85%), Gaps = 4/76 (5%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S +DP VLDVGQ+LVVPLPCTCFNGSDNSLPAIYLSY    VD+ A +AARY TTLTDLM
Sbjct: 52  SISDPLVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSY----VDTFAVVAARYFTTLTDLM 107

Query: 69  NVNAMGSTAISDGDIL 84
           NVN MGSTAI++GDI 
Sbjct: 108 NVNVMGSTAINNGDIF 123


>Glyma12g30720.1 
          Length = 102

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/72 (79%), Positives = 64/72 (88%), Gaps = 3/72 (4%)

Query: 9   SXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLM 68
           S +DP   DVGQ+LVVPLPCTCFNGSDNSLPAIYLSYVV+PVD+LA +A RY TT TDLM
Sbjct: 33  SISDP---DVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAVVAVRYFTTFTDLM 89

Query: 69  NVNAMGSTAISD 80
           NVN+MGSTAI+D
Sbjct: 90  NVNSMGSTAIND 101


>Glyma12g30820.1 
          Length = 112

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/68 (79%), Positives = 61/68 (89%)

Query: 17  DVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLMNVNAMGST 76
           DV Q+L+VPLPCT FNGS+NSLPAIYLSYVV+PVD+L  +AARY TTLT LMNVNAMGST
Sbjct: 45  DVSQNLIVPLPCTYFNGSNNSLPAIYLSYVVRPVDTLVVVAARYFTTLTYLMNVNAMGST 104

Query: 77  AISDGDIL 84
           AI+D DIL
Sbjct: 105 AINDDDIL 112


>Glyma18g06900.1 
          Length = 123

 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 58/69 (84%), Gaps = 3/69 (4%)

Query: 7   LTSXTDPSVLDVGQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTD 66
           + S +DP   DVGQ+L+VPLPCTCFNGSDNSLPAIYLSY V+PVD+L  IAARY  TLTD
Sbjct: 57  VNSISDP---DVGQNLIVPLPCTCFNGSDNSLPAIYLSYAVRPVDTLVVIAARYFITLTD 113

Query: 67  LMNVNAMGS 75
            MNVNAMGS
Sbjct: 114 SMNVNAMGS 122


>Glyma05g26420.1 
          Length = 375

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 12/162 (7%)

Query: 19  GQSLVVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLMNVNAMGS-TA 77
           G  L +PLPC+C      S+  ++ +++V P  ++  IA  + TT   L+N+N +     
Sbjct: 158 GDMLYIPLPCSCDEVGGKSV--VHYAHLVAPQSTVEGIAEEFGTTQQILLNLNGISDPKN 215

Query: 78  ISDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSC-GPRNLNLYCMPTS 136
           +  G IL VP+ AC+SN    + D+ LLVPN +YA TA  CV+C C    N  L C P+ 
Sbjct: 216 LQAGQILDVPLQACSSNVKNDSLDYPLLVPNATYAYTAHECVKCKCDSSNNFILQCEPSQ 275

Query: 137 LS----ASCSSMQCKNSNLMLGNVTAQQSSAGCNVSSCSYDG 174
           L     + C SM+C ++N+++G      SS  CN ++C+Y G
Sbjct: 276 LKPTNWSVCPSMEC-SANVLIGKTI---SSDSCNRTTCAYTG 313


>Glyma05g35160.1 
          Length = 267

 Score = 91.7 bits (226), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 28/161 (17%)

Query: 23  VVPLPCTCFNGSDNSLPAIYLSYVVQPVDSLAAIAARYLTTLTDLMNVNAMGST------ 76
           V+PLPCTCF+  ++   AIY+S VVQ  +SL +IA ++ TT ++L +VN  G        
Sbjct: 107 VIPLPCTCFDNVNDGGSAIYMSCVVQRRESLGSIATKFGTTASNLESVNGFGEATRETLH 166

Query: 77  --AISDGDILAVPIPAC-------ASNFPKSASDFG-------------LLVPNGSYAIT 114
              + + ++  + +  C          F K    FG             ++VPN SY +T
Sbjct: 167 ELVVLNKEMRWICLARCPNLQLFLQDFFFKIVPSFGACSSATLNWYDESMIVPNASYTLT 226

Query: 115 AGHCVQCSCGPRNLNLYCMPTSLSASCSSMQCKNSNLMLGN 155
           A +C++C+C P ++ L C+P+     C +++CK SNL++G+
Sbjct: 227 ATNCIKCTCEPTDITLQCVPSGFDVPCYNLRCKGSNLIIGD 267