Miyakogusa Predicted Gene

Lj0g3v0219169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0219169.1 Non Chatacterized Hit- tr|I1KM96|I1KM96_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,61.9,0.0000002,DUF4219,Domain of unknown function
DUF4219,CUFF.14174.1
         (56 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g34840.1                                                        60   7e-10
Glyma15g17820.1                                                        51   3e-07
Glyma17g16230.1                                                        46   8e-06

>Glyma07g34840.1 
          Length = 1562

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 32/42 (76%)

Query: 12 TTSPIPIFNGEHYDYWSSQMETIFLSQDLWDMVEEEFEVRPD 53
          +T  IPIFNGE+YD+W  +MET F SQDLWD+VEE F +  D
Sbjct: 8  STISIPIFNGENYDFWRVKMETYFSSQDLWDIVEEGFTIPAD 49


>Glyma15g17820.1 
          Length = 629

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 9  FSYTTSPIPIFNGEHYDYWSSQMETIFLSQDLWDMVEEEFEVRPDP 54
          FS+ T  +PIF+GE+YD W  +M++   S DLWD VEE++E+ P P
Sbjct: 7  FSHIT--LPIFDGENYDLWEVKMQSYMESLDLWDGVEEDYEIYPLP 50


>Glyma17g16230.1 
          Length = 853

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 28/38 (73%)

Query: 17  PIFNGEHYDYWSSQMETIFLSQDLWDMVEEEFEVRPDP 54
           P+F+G++Y  W+++ME    + DLW+ VEE++EV P P
Sbjct: 90  PVFDGDNYQIWATRMEAHLEANDLWEAVEEDYEVLPLP 127