Miyakogusa Predicted Gene

Lj0g3v0218639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0218639.1 Non Chatacterized Hit- tr|G7IGQ6|G7IGQ6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,32.85,0.000000003,DUF4283,Domain of unknown function
DUF4283,CUFF.14131.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g10240.1                                                        53   2e-07

>Glyma09g10240.1 
          Length = 2152

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 3/167 (1%)

Query: 7   EEKVWIERCAVATLYNVTSPEAVQEGLRMQGLVNLKIKLLGARDVLLEFVSKDEMVFTLS 66
           E+ +W++   VA L N    + V+E L  +   +++   +G   VLL  +S+ +    ++
Sbjct: 230 EDTLWLKEAWVAHLKNPAVYDRVEEELLWETGKDIRTTFMGDDQVLLLGLSEHDANQLIN 289

Query: 67  EASSVLDENFEWYNPCSAYTVGQSNLAWLRVRKIPLGMWNTSFFCTVANLFGKYVCVDSI 126
              + L  + E ++P          L W++   IP+  WN   F  +    G+ V +D  
Sbjct: 290 GGRTFLFSSIERWHPNMRVDY---RLTWIQCWGIPVQAWNPKHFNQIIAAMGEVVDIDDA 346

Query: 127 TSRKDRLDFARVLVDTTQPLIDQQYLDVNFDGKVCQVLVEKELSVYH 173
              K R+D AR+L+ T      Q  ++V  DG    V + +E    H
Sbjct: 347 VEEKRRVDKARLLIRTQWRPSIQHTVEVMIDGAKFMVHITEESCQGH 393