Miyakogusa Predicted Gene
- Lj0g3v0217659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0217659.1 tr|B9HBX1|B9HBX1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561467 PE=3
SV=1,52.88,2e-18,SUBFAMILY NOT NAMED,NULL; NITRATE, FROMATE, IRON
DEHYDROGENASE,NULL; A_tha_TIGR01569: plant integral,CUFF.14060.1
(197 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g36150.1 229 1e-60
Glyma02g36170.1 227 8e-60
Glyma10g08740.1 223 7e-59
Glyma10g08720.1 220 9e-58
Glyma02g36200.1 218 2e-57
Glyma10g08730.1 214 4e-56
Glyma02g36140.1 195 3e-50
Glyma10g08750.1 184 8e-47
Glyma12g31180.1 140 1e-33
Glyma13g39130.1 126 2e-29
Glyma19g24400.1 116 2e-26
Glyma02g12200.1 108 3e-24
Glyma20g04470.1 100 1e-21
Glyma20g04460.2 99 2e-21
Glyma20g04460.1 99 2e-21
Glyma07g38090.1 50 1e-06
>Glyma02g36150.1
Length = 194
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 1 MSTTIDMPGSSKAAKAGKPVLVTTPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLS 60
MSTTID+P SS AK + V++ PSR GGWKKGVAIMDF TMG S
Sbjct: 1 MSTTIDVPESSNVAK--EKVVLAAPSRSGGWKKGVAIMDFILRLGAIAAALGAAATMGTS 58
Query: 61 DQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFL 120
DQTLP EASYDSFTTFQFFVITMALVAGYLVLSLP SIVAI+RPHA GPRLFL
Sbjct: 59 DQTLPFFTQFFQFEASYDSFTTFQFFVITMALVAGYLVLSLPFSIVAIIRPHAVGPRLFL 118
Query: 121 IILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXX 180
IILDTVF IVYLAHNGNQD+NW+AICNQFGDFCAQTSG
Sbjct: 119 IILDTVFLTLATASGASAAAIVYLAHNGNQDSNWLAICNQFGDFCAQTSGAVVSSFVSVV 178
Query: 181 XXXXXXXMSALVLGKKH 197
MSAL L ++H
Sbjct: 179 IFVLLIVMSALAL-RRH 194
>Glyma02g36170.1
Length = 195
Score = 227 bits (578), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 128/195 (65%), Gaps = 1/195 (0%)
Query: 1 MSTTIDMPGSSKAAKAGKPVLVTTPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLS 60
MSTTI++P SSK AK GK V V P+RPGGWKKGVAIMDF TMG S
Sbjct: 1 MSTTIEIPESSKVAK-GKAVAVVAPARPGGWKKGVAIMDFILRLGAIAAALGAAATMGTS 59
Query: 61 DQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFL 120
DQTLP EASYDSFTTFQFFVITM+LV GYLVLSLP SIVAIVRPHA GPRLFL
Sbjct: 60 DQTLPFFTQFFQFEASYDSFTTFQFFVITMSLVGGYLVLSLPFSIVAIVRPHAVGPRLFL 119
Query: 121 IILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXX 180
IILDT F IVYLAHNG+QDTNW+AICNQFGDFCAQTS
Sbjct: 120 IILDTAFLTLATAGGASAAAIVYLAHNGDQDTNWLAICNQFGDFCAQTSAAVVSSFVAVV 179
Query: 181 XXXXXXXMSALVLGK 195
MSAL +GK
Sbjct: 180 VLVLLIIMSALAIGK 194
>Glyma10g08740.1
Length = 195
Score = 223 bits (569), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 1 MSTTIDMPGSSKAAKAGKPVLVTTPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLS 60
MSTTID+P S+ AK K +L+ RPGGWKKGVAIMDF TMG S
Sbjct: 1 MSTTIDVPESNNVAKE-KVLLLGARPRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTS 59
Query: 61 DQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFL 120
DQTLP EASYDSFTTFQFFVITMALVAGYLVLSLP SIV I+RPHA GPRLFL
Sbjct: 60 DQTLPFFTQFFQFEASYDSFTTFQFFVITMALVAGYLVLSLPFSIVVIIRPHAVGPRLFL 119
Query: 121 IILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXX 180
IILDTVF IVYLAHNGNQD+NW+AICNQFGDFCAQTSG
Sbjct: 120 IILDTVFLTLATASGASAAAIVYLAHNGNQDSNWLAICNQFGDFCAQTSGAVVSSLVSVV 179
Query: 181 XXXXXXXMSALVLGKK 196
MSAL L +
Sbjct: 180 IFVLLIVMSALALRRN 195
>Glyma10g08720.1
Length = 194
Score = 220 bits (560), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 115/168 (68%), Positives = 120/168 (71%), Gaps = 2/168 (1%)
Query: 1 MSTTIDMPGSSKAAKAGKPVLVTTPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLS 60
MSTTID+P SS AK GK VLV P RPGGWKKGVAIMDF TMG S
Sbjct: 1 MSTTIDVPESSNVAK-GKAVLVA-PPRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTS 58
Query: 61 DQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFL 120
DQTLP EASYDSFT+FQFFVITMALV GYLVLSLP S VAI+RPHAAGPRLFL
Sbjct: 59 DQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFL 118
Query: 121 IILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQT 168
IILDTVF IVYLAHNGNQD+NW+AICNQFGDFCAQT
Sbjct: 119 IILDTVFLTLTTASGASAAAIVYLAHNGNQDSNWLAICNQFGDFCAQT 166
>Glyma02g36200.1
Length = 194
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 119/168 (70%), Gaps = 2/168 (1%)
Query: 1 MSTTIDMPGSSKAAKAGKPVLVTTPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLS 60
MSTTID+P SS AK GK VL P RPGGWKKGVAIMDF TMG S
Sbjct: 1 MSTTIDVPESSNVAK-GKAVLAA-PPRPGGWKKGVAIMDFILRLGAIAAALGAAATMGTS 58
Query: 61 DQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFL 120
DQTLP EASYDSFT+FQFFVITMALV GYLVLSLP S VAI+RPHAAGPRLFL
Sbjct: 59 DQTLPFFTQFFQFEASYDSFTSFQFFVITMALVGGYLVLSLPFSFVAIIRPHAAGPRLFL 118
Query: 121 IILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQT 168
IILDTVF IVYLAHNGNQD+NW+AICNQFGDFCAQT
Sbjct: 119 IILDTVFLTLATASGASAAAIVYLAHNGNQDSNWLAICNQFGDFCAQT 166
>Glyma10g08730.1
Length = 196
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 126/195 (64%)
Query: 1 MSTTIDMPGSSKAAKAGKPVLVTTPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLS 60
MSTTI++P SS GK V+V P+RPGGWKKGVAIMDF TMG S
Sbjct: 1 MSTTIEIPESSTKVAKGKGVVVVAPARPGGWKKGVAIMDFILRLGAIAAALGAAATMGTS 60
Query: 61 DQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFL 120
DQTLP EASYDSFTTFQFFVITMALV GYLVLSLP SIVAIVRPHA GPRL L
Sbjct: 61 DQTLPFFTQFFQFEASYDSFTTFQFFVITMALVGGYLVLSLPFSIVAIVRPHAVGPRLSL 120
Query: 121 IILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXX 180
IILDTVF IVYLAHNG+QDTNW+AICNQFGDFCAQTS
Sbjct: 121 IILDTVFLTLATAGGASAAAIVYLAHNGDQDTNWLAICNQFGDFCAQTSAAVVSSLVAVL 180
Query: 181 XXXXXXXMSALVLGK 195
MSAL +GK
Sbjct: 181 VLVLLIVMSALAIGK 195
>Glyma02g36140.1
Length = 200
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 112/174 (64%), Gaps = 4/174 (2%)
Query: 1 MSTTIDMPGSSKAAKA---GKPVLVTTPSRP-GGWKKGVAIMDFXXXXXXXXXXXXXXXT 56
MSTTID+P S + G + P RP GGWKKGVAI+DF T
Sbjct: 1 MSTTIDVPAESSKINSIANGIRKVPGAPPRPEGGWKKGVAILDFILRLGAIASALGAAAT 60
Query: 57 MGLSDQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGP 116
M SD+TLP EASYDSF+TFQFFVI MA V GYLVLSLP SIV I+RPHAAGP
Sbjct: 61 MATSDETLPFFTQFFQFEASYDSFSTFQFFVIAMAFVGGYLVLSLPFSIVTIIRPHAAGP 120
Query: 117 RLFLIILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSG 170
RLFLIILDTVF IVYLAHNGNQD+NW+AICNQFGDFC + SG
Sbjct: 121 RLFLIILDTVFLTLATSSAAAATAIVYLAHNGNQDSNWLAICNQFGDFCQEISG 174
>Glyma10g08750.1
Length = 200
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Query: 1 MSTTIDMPGSSKAAKA---GKPVLVTTPSRP-GGWKKGVAIMDFXXXXXXXXXXXXXXXT 56
MSTTID+P + + G + P RP GGWKKG+AI+DF T
Sbjct: 1 MSTTIDVPAETTSKNNIGNGIRKVPGAPPRPEGGWKKGLAIIDFVLRLGAIASALGAAAT 60
Query: 57 MGLSDQTLPXXXXXXXXEASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGP 116
M SD+TLP EASYDSF+TFQ+FVI MA V GYLVLSLP SIV I+R HAAGP
Sbjct: 61 MATSDETLPFFTQFFQFEASYDSFSTFQYFVIAMAFVGGYLVLSLPFSIVTIIRLHAAGP 120
Query: 117 RLFLIILDTVFXXXXXXXXXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSG 170
RLFLIILDTVF IVYLAHNGNQD+NW+AICNQFGDFC SG
Sbjct: 121 RLFLIILDTVFLTIATSSAAAATAIVYLAHNGNQDSNWLAICNQFGDFCQAISG 174
>Glyma12g31180.1
Length = 218
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 80/146 (54%)
Query: 24 TPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTF 83
TP GGWKKGVAI+DF MG S+Q LP A +D F F
Sbjct: 46 TPLPRGGWKKGVAILDFIIRLGAIGSALGAAAIMGNSEQILPFFTQFFQFHAQWDDFPMF 105
Query: 84 QFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVY 143
QFFV G+L+LSLP SIV IVRP+ GPRL L+ILD + +VY
Sbjct: 106 QFFVFANGAAGGFLILSLPFSIVCIVRPYTVGPRLLLVILDILMMALVMAAASSAAAVVY 165
Query: 144 LAHNGNQDTNWIAICNQFGDFCAQTS 169
LAHNG+QD NWIAIC QF DFC TS
Sbjct: 166 LAHNGSQDANWIAICQQFTDFCQVTS 191
>Glyma13g39130.1
Length = 239
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 79/146 (54%)
Query: 24 TPSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTF 83
TP GWKKGVAI+DF MG S+Q LP A +D F F
Sbjct: 67 TPLPRAGWKKGVAILDFILRLGAIGSALGAAAIMGNSEQILPFFTQFFQFHAQWDDFPMF 126
Query: 84 QFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVY 143
QFFV G+L+LSLP SIV IVRP A GPRL L+ILD + +VY
Sbjct: 127 QFFVFANGAAGGFLILSLPFSIVCIVRPFAVGPRLLLVILDILMMALVMAAASAAAAVVY 186
Query: 144 LAHNGNQDTNWIAICNQFGDFCAQTS 169
LAHNG+QD NWIAIC QF DFC TS
Sbjct: 187 LAHNGSQDANWIAICQQFTDFCQVTS 212
>Glyma19g24400.1
Length = 212
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 71/139 (51%)
Query: 31 WKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTFQFFVITM 90
WKKG+A+ DF TMG +++ LP A + F FQFFV
Sbjct: 47 WKKGIAVTDFVLRLGAIGAAMGSAVTMGTNEEQLPFFTQFLQFHAQWSDFPVFQFFVFAN 106
Query: 91 ALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVYLAHNGNQ 150
+++GY +LSLP S V IV+PHA PRL L+ DTV IVY+ HNG+Q
Sbjct: 107 GVISGYAILSLPFSYVCIVQPHAVRPRLLLMTFDTVMMGLISVAAAGAAAIVYVGHNGSQ 166
Query: 151 DTNWIAICNQFGDFCAQTS 169
D NW+A C F +FC S
Sbjct: 167 DANWMAFCQGFTNFCQAAS 185
>Glyma02g12200.1
Length = 186
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%)
Query: 30 GWKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTFQFFVIT 89
G +G++IMDF MG +++TLP A +D + FFV+
Sbjct: 20 GVARGLSIMDFILRIIAAVATLGSALAMGTTNETLPFATQFIKFRAEFDDLPSLVFFVMA 79
Query: 90 MALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVYLAHNGN 149
A+V GYLVLSL +S+ I+R A R+ L+ LDTV IVY+AHNGN
Sbjct: 80 NAVVCGYLVLSLMISVFHILRSTAVKSRILLVALDTVMLSLVTASASAATSIVYIAHNGN 139
Query: 150 QDTNWIAICNQFGDFCAQTSG 170
NW AIC Q+ +FC + SG
Sbjct: 140 TGANWFAICQQYNNFCERISG 160
>Glyma20g04470.1
Length = 186
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 25 PSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTFQ 84
P R G +G++IMDF MG + QTLP A + TF
Sbjct: 16 PPRKG-LIRGLSIMDFILRIVAAIATLGSALGMGTTRQTLPFSTQFVKFRAVFSDVPTFV 74
Query: 85 FFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVYL 144
FFV + ++V GYLVLSL LS IVR A R+ + LDTV IVY
Sbjct: 75 FFVTSNSIVCGYLVLSLVLSFFHIVRSAAVKSRVLQVFLDTVMYGLLTTGASAATAIVYE 134
Query: 145 AHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXXXXXXXXXMSALVLGK 195
AH GN +TNW C Q+ FC Q SG MSA+ + K
Sbjct: 135 AHYGNSNTNWFPFCRQYNHFCKQISGSLIGSFIAVVLFIILILMSAISISK 185
>Glyma20g04460.2
Length = 186
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 25 PSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTFQ 84
P R G +G++IMDF MG + QTLP A + TF
Sbjct: 16 PPRKG-LIRGLSIMDFILRIVAAIATLGSALGMGTTRQTLPFSTQFVKFRAVFSDLPTFV 74
Query: 85 FFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVYL 144
FFV + ++V GYLVLSL LS IVR A ++ + LDTV IVY
Sbjct: 75 FFVTSNSIVCGYLVLSLVLSFFHIVRSAAVKSKVLQVFLDTVMYGLLTTGASAATAIVYE 134
Query: 145 AHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXXXXXXXXXMSALVLGK 195
AH GN +TNW C Q+ FC Q SG MSA+ + K
Sbjct: 135 AHYGNSNTNWFPFCRQYNRFCKQISGSLIGSFIAVVLFIILILMSAISISK 185
>Glyma20g04460.1
Length = 186
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 74/171 (43%), Gaps = 1/171 (0%)
Query: 25 PSRPGGWKKGVAIMDFXXXXXXXXXXXXXXXTMGLSDQTLPXXXXXXXXEASYDSFTTFQ 84
P R G +G++IMDF MG + QTLP A + TF
Sbjct: 16 PPRKG-LIRGLSIMDFILRIVAAIATLGSALGMGTTRQTLPFSTQFVKFRAVFSDLPTFV 74
Query: 85 FFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXXXXXXXXIVYL 144
FFV + ++V GYLVLSL LS IVR A ++ + LDTV IVY
Sbjct: 75 FFVTSNSIVCGYLVLSLVLSFFHIVRSAAVKSKVLQVFLDTVMYGLLTTGASAATAIVYE 134
Query: 145 AHNGNQDTNWIAICNQFGDFCAQTSGXXXXXXXXXXXXXXXXXMSALVLGK 195
AH GN +TNW C Q+ FC Q SG MSA+ + K
Sbjct: 135 AHYGNSNTNWFPFCRQYNRFCKQISGSLIGSFIAVVLFIILILMSAISISK 185
>Glyma07g38090.1
Length = 188
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 75 ASYDSFTTFQFFVITMALVAGYLVLSLPLSIVAIVRPHAAGPRLFLIILDTVFXXXXXXX 134
A + + F +F++T A+ Y +SL L++V R + G + +LDT
Sbjct: 68 AKWHQMSAFVYFLVTNAIACTYAAMSLLLALVN--RGKSKGLWTLIAVLDTFMVALLFSG 125
Query: 135 XXXXXXIVYLAHNGNQDTNWIAICNQFGDFCAQTSG 170
+ L + GN NW +CN FG FC Q +
Sbjct: 126 NGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAA 161