Miyakogusa Predicted Gene

Lj0g3v0216909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0216909.1 tr|A8HQL5|A8HQL5_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_157307 PE=4
SV=1,27.95,4e-17,Tryptophan synthase beta subunit-like PLP-dependent
enzymes,Tryptophan synthase beta subunit-like PL,CUFF.14078.1
         (418 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g37670.1                                                       664   0.0  
Glyma15g27670.1                                                       167   2e-41

>Glyma11g37670.1 
          Length = 397

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/400 (80%), Positives = 355/400 (88%), Gaps = 13/400 (3%)

Query: 12  VISKPKLKTEEFIEKLLN-RRWTLPCPETKIHQVIHGNGLHGRNFLLNTQPAFRDGTVEM 70
           ++SKP+L  EEF +K+LN RRWTLP PE KIHQ+IH     G  FLLNT P+F D    +
Sbjct: 1   IVSKPELGNEEFTQKVLNNRRWTLPSPEAKIHQLIH---TQGPTFLLNTHPSFGDAN-RV 56

Query: 71  DKQKKSFYIVRDDLLHPLINGNKGRKLDGLLPLIEDYSVTDVVTCGGCQSAHTAAIAVLC 130
           ++Q+K FY+VRDDLLHPL+NGNK RKLDGLLPL++ YSVTDVVTCGGCQSAHTAAIAVLC
Sbjct: 57  NEQRKYFYVVRDDLLHPLVNGNKARKLDGLLPLLQHYSVTDVVTCGGCQSAHTAAIAVLC 116

Query: 131 AERGIVSHLLLRGEQPEILTGYNLMSTIYGNVTYVPRTIYANREDMLKSYAKSVAGNHGS 190
           AERGIVSHLLLRGEQPEILTGYNLMST+YGNVTYVPRT+YANRE+MLKSYA+SVAGN GS
Sbjct: 117 AERGIVSHLLLRGEQPEILTGYNLMSTMYGNVTYVPRTVYANREEMLKSYAESVAGNDGS 176

Query: 191 VHWFSDIIQASS--------NFMQMDVSTSEGNHLQKILIVNEGAGDSVALLGIIRLVQY 242
           V WF DI+QASS        NFMQMDVS SE NHL+KIL+V+EGAGDSVALLG+IRLVQY
Sbjct: 177 VLWFGDIVQASSATELFTDPNFMQMDVSRSEENHLRKILVVSEGAGDSVALLGVIRLVQY 236

Query: 243 LSQDHLLGKQRAMKFVLDAGTGTTAVGIGLAAHCLGLPWEVYAVMLADKIDGYRKQEERL 302
           LSQ+HLLGKQR MKFV+DAGTGTTA+G+GLAA CLGLPWEVYAVMLADKIDGYRKQEERL
Sbjct: 237 LSQNHLLGKQRLMKFVVDAGTGTTAIGLGLAARCLGLPWEVYAVMLADKIDGYRKQEERL 296

Query: 303 TSEFKKHFNFEFSEHNLNREDAGIVHWVERGHARKFGNILEGEMEACQQIAQETGILVDP 362
            SEFKKHFN EF +HN+NREDAGIV+WVERG  RKFGN+LEGE+EACQQIAQ+TGILVDP
Sbjct: 297 LSEFKKHFNIEFIDHNVNREDAGIVNWVERGRPRKFGNVLEGEVEACQQIAQQTGILVDP 356

Query: 363 VYTLAAWETAMLLSGKEAEGGPEVVMLHTGGTFGMFGLAQ 402
           VYTLAAWETAMLLS  EAEGGPEVV+LHTGGT GMFGLAQ
Sbjct: 357 VYTLAAWETAMLLSSNEAEGGPEVVLLHTGGTLGMFGLAQ 396


>Glyma15g27670.1 
          Length = 165

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/117 (72%), Positives = 95/117 (81%), Gaps = 9/117 (7%)

Query: 145 QPEILTGYNLMSTIYGNVTYVPRTIYANREDMLKSYAKSVAGNHGSVHWFSDIIQA---- 200
           QP+IL GY LMST+YGNVTYVPRT YANRE+MLKSYA+SVAGN G   WF DI+QA    
Sbjct: 21  QPDILAGYKLMSTMYGNVTYVPRTFYANREEMLKSYAESVAGNDGFALWFGDIVQAFSTI 80

Query: 201 ----SSNFMQMDVSTSEGNHLQKILIVNEGAGDSVALLGIIRLVQYLSQDHLLGKQR 253
               S N MQMDVS S+G+HL KIL+ NEGAGDSVALLG+IRLVQYLS +HLLGKQR
Sbjct: 81  ELSTSPNSMQMDVSRSKGSHL-KILVSNEGAGDSVALLGVIRLVQYLSHNHLLGKQR 136