Miyakogusa Predicted Gene

Lj0g3v0216559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0216559.1 Non Chatacterized Hit- tr|I1HJT8|I1HJT8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,37.11,2e-19,SNF2_N,SNF2-related; P-loop containing nucleoside
triphosphate hydrolases,NULL; ATP BINDING / DNA BI,CUFF.13976.1
         (183 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36460.1                                                       318   2e-87
Glyma13g27170.1                                                       297   4e-81
Glyma18g02720.1                                                        96   2e-20
Glyma02g42980.1                                                        92   4e-19
Glyma14g06090.1                                                        91   8e-19
Glyma12g00950.1                                                        76   2e-14
Glyma08g45330.1                                                        74   1e-13
Glyma08g45340.1                                                        69   2e-12
Glyma11g35680.1                                                        53   2e-07
Glyma20g37100.1                                                        51   5e-07
Glyma12g13180.1                                                        48   5e-06

>Glyma12g36460.1 
          Length = 883

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/183 (83%), Positives = 174/183 (95%), Gaps = 1/183 (0%)

Query: 2   DSVSISCQDILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEV 61
           ++ S+SCQ+ILLK+P+ILILDEGHNPRNENT+MV SLAKV+T RKVVLSGTLYQNHV+EV
Sbjct: 475 NNTSLSCQEILLKIPTILILDEGHNPRNENTDMVQSLAKVQTARKVVLSGTLYQNHVREV 534

Query: 62  FNILNLVRPKFLKMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDL 121
           FNILNLVRPKFLKMETSRPIV+RIHSRVHIPG ++F+DLVE+TLQKD DFKRKIAVIQDL
Sbjct: 535 FNILNLVRPKFLKMETSRPIVRRIHSRVHIPGVRSFYDLVENTLQKDTDFKRKIAVIQDL 594

Query: 122 REMTSKVLHYYKGDFLDELPGLVDFTVILNLTPRQKHEIEKLKNIS-RKFKVSSLGSALY 180
           REMTSKVLHYYKGDFLDELPGLVDFTV+L L+PRQK EI+KLK +S RKFK++S+GSA+Y
Sbjct: 595 REMTSKVLHYYKGDFLDELPGLVDFTVVLTLSPRQKPEIQKLKKLSRRKFKINSVGSAVY 654

Query: 181 LHP 183
           LHP
Sbjct: 655 LHP 657


>Glyma13g27170.1 
          Length = 824

 Score =  297 bits (761), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 144/181 (79%), Positives = 163/181 (90%)

Query: 3   SVSISCQDILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVF 62
           S S+SC+ ILL VPSILILDEGHNPRNENT+MV SL +V T+ KVVLSGTLYQNHVKEVF
Sbjct: 430 SESLSCKKILLNVPSILILDEGHNPRNENTDMVQSLVEVHTRLKVVLSGTLYQNHVKEVF 489

Query: 63  NILNLVRPKFLKMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDLR 122
           NILNLVRPKFLKMETS+PIV+RI SRVH PG ++F+DLVE+TL+KD  FK K+AVIQDLR
Sbjct: 490 NILNLVRPKFLKMETSKPIVRRIRSRVHTPGVRSFYDLVENTLEKDTHFKTKVAVIQDLR 549

Query: 123 EMTSKVLHYYKGDFLDELPGLVDFTVILNLTPRQKHEIEKLKNISRKFKVSSLGSALYLH 182
           EMTSKVLHYYKGDFLDELPGLVDFTV+LNL+PRQK E+EKLK +S  FK SS+GSA+YLH
Sbjct: 550 EMTSKVLHYYKGDFLDELPGLVDFTVVLNLSPRQKPEVEKLKRLSGNFKKSSVGSAVYLH 609

Query: 183 P 183
           P
Sbjct: 610 P 610


>Glyma18g02720.1 
          Length = 1167

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 10/161 (6%)

Query: 12  LLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRPK 71
           L + P ILILDEGHNPR+  + +   L K+KT  +++LSGTL+QN+  E FN L L RPK
Sbjct: 754 LREGPGILILDEGHNPRSTKSRLRKGLMKLKTDLRILLSGTLFQNNFCEYFNTLCLARPK 813

Query: 72  FLK--METSRPIVKRIHSRVHIPG-------KKTFFDLVEDTLQKDPDFKRKIAVIQDLR 122
           F+   ++T  PI +R    V   G       +K F D +   +      +R +  +  LR
Sbjct: 814 FISEVLDTLDPITRRKSKTVEKAGHLLESRARKLFLDKIAKKIDSGIGNER-MQGLNMLR 872

Query: 123 EMTSKVLHYYKGDFLDELPGLVDFTVILNLTPRQKHEIEKL 163
           E T+  +  Y+ +  D  PGL  +T+++N T +Q+  + KL
Sbjct: 873 ETTNGFVDVYESENFDSAPGLQIYTLLMNTTDKQREILPKL 913


>Glyma02g42980.1 
          Length = 1266

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 11/159 (6%)

Query: 11   ILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRP 70
            +L + P I++LDEGHNPR+  + +   L KV+T+ +++LSGTL+QN+  E FN L L RP
Sbjct: 850  VLRESPGIMVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLCLARP 909

Query: 71   KFL---------KMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDL 121
            KF+         K +    + K+    +    +K F D +   +  +   +R+   ++ L
Sbjct: 910  KFIHEVLKALDSKYKRKGKVAKKASHLLESRARKFFLDQIAKKIDSNNGRERRQG-LKML 968

Query: 122  REMTSKVLHYYKGDFLDELPGLVDFTVILNLTPRQKHEI 160
            R +T+  +  Y+G   D LPGL  +T+++N T  Q HEI
Sbjct: 969  RNVTNGFIDVYEGRSSDGLPGLQIYTLLMNSTDTQ-HEI 1006


>Glyma14g06090.1 
          Length = 1307

 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 11/159 (6%)

Query: 11   ILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRP 70
            +L + P +++LDEGHNPR+  + +   L KV+T+ +++LSGTL+QN+  E FN L L RP
Sbjct: 891  VLRESPGVMVLDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLCLARP 950

Query: 71   KFL---------KMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDL 121
            KF+         K +    + K+    +    +K F D +   +      +R+   ++ L
Sbjct: 951  KFIHEVLKALDPKYKRKGKVAKKASHLLESRARKFFLDQIAKKIDSSNGRERRKG-LKML 1009

Query: 122  REMTSKVLHYYKGDFLDELPGLVDFTVILNLTPRQKHEI 160
            R +T+  +  Y+G   D LPGL  +T+++N T  Q HEI
Sbjct: 1010 RNVTNGFIDVYEGGSSDGLPGLQIYTLLMNSTDTQ-HEI 1047


>Glyma12g00950.1 
          Length = 721

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 13/179 (7%)

Query: 11  ILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRP 70
           +L   P +L+LDEGH PRN+N+ +   L++ +T+++++LSGT +QN+  E++NIL L++P
Sbjct: 313 VLRDYPGLLVLDEGHTPRNQNSYIWKVLSESRTKKRILLSGTPFQNNFLELYNILCLMKP 372

Query: 71  KFLKMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDLREMTSKVLH 130
            F      + + K   SR     K   +D    +     D K K+     L+ + +  +H
Sbjct: 373 SFPD-SIPQELKKFCQSRQMQERKDVSWDWEPVSSGNTADEKIKL-----LKLLMNPFVH 426

Query: 131 YYKGDFLDE-LPGLVDFTVILNLTPRQKHEIEKLK------NISRKFKVSSLGSALYLH 182
            +KG  L + LPGL D  ++L     Q+  +E ++      N   K  + S+  +L+L+
Sbjct: 427 VHKGSILQKNLPGLRDCVLVLKPDILQQETLESIEYSQSALNFEHKLALVSVHPSLFLN 485


>Glyma08g45330.1 
          Length = 717

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 11  ILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRP 70
           +L   P +LILDEGH PRN+ + +   L++ ++Q++V+LSGT +QN+  E++NIL L++P
Sbjct: 308 VLRDYPGLLILDEGHTPRNQRSYIWKVLSESRSQKRVLLSGTPFQNNFLELYNILCLMKP 367

Query: 71  KFLKMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDLREMTSKVLH 130
            F      + + K   SR+    K + +   E     +   ++    I+ L+ + +  +H
Sbjct: 368 SFPD-SIPQELKKFCQSRLRKERKASKYASYEPIYSGNSADEK----IKQLKSLMNPFVH 422

Query: 131 YYKGDFLDE-LPGLVDFTVILNLTPRQKHEI------EKLKNISRKFKVSSLGSALYLH 182
            +KG  L + LPGL D  ++L     Q+  +      + + N   K  + S+  +L+L+
Sbjct: 423 VHKGSILQKNLPGLRDCVLVLKPDRLQQETLDIIDSSQNILNFEHKLALVSVHPSLFLN 481


>Glyma08g45340.1 
          Length = 739

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 3   SVSISCQDILLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVF 62
           S+  +   +L   P +L+LDEGH PRN+ + +   L++ ++Q++++LSGT +QN+  E+F
Sbjct: 326 SIETAMGKVLRDYPGLLVLDEGHTPRNQRSCIWKVLSESRSQKRILLSGTPFQNNFLELF 385

Query: 63  NILNLVRPKFLKMETSRPIVKRIHSRVHIPGKKTFFDLVEDTLQKDPDFKRKIAVIQDLR 122
           NI  L++P F      + + K   S++ I  +K   D+  +++        K   I+ L+
Sbjct: 386 NIFCLMKPSFSD-NIPQELKKFCQSKL-IQERKASKDVSWESINSGNPADEK---IKQLK 440

Query: 123 EMTSKVLHYYKGDFLDE-LPGLVDFTVIL 150
            + +  +H +KG  L + L GL D  +IL
Sbjct: 441 LLMNPFVHVHKGSILQKNLLGLQDCVLIL 469


>Glyma11g35680.1 
          Length = 786

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 12  LLKVPSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNH 57
           L + P ILILDEGHNPR+  + +   L KV+T  +++LSGTL+QN+
Sbjct: 504 LREGPGILILDEGHNPRSTKSRLRKGLMKVETDLRILLSGTLFQNN 549


>Glyma20g37100.1 
          Length = 1573

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 16   PSILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRPKFL 73
            P IL+ DE H  +N   ++  +L +VK QR++ L+G+  QN++ E + +++ VR  FL
Sbjct: 977  PDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 1034


>Glyma12g13180.1 
          Length = 870

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)

Query: 17  SILILDEGHNPRNENTNMVHSLAKVKTQRKVVLSGTLYQNHVKEVFNILNLVRPKFL 73
           +I+I+DE H  +NE + +  +  ++KT R+  L+GT  QN + E+FN+ + V P  L
Sbjct: 260 NIVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTAMQNKIMELFNLFDWVAPGSL 316