Miyakogusa Predicted Gene

Lj0g3v0214869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0214869.1 Non Chatacterized Hit- tr|B4FC91|B4FC91_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,66.67,1e-16,seg,NULL,CUFF.13851.1
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08340.1                                                       136   4e-33
Glyma17g12650.1                                                       134   2e-32

>Glyma05g08340.1 
          Length = 327

 Score =  136 bits (343), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 67/95 (70%), Positives = 73/95 (76%)

Query: 9   SEEEVTQLFIDXXXXXXXXXXXAGRKCRLALSIDANDVRALYNWSLALSFRGQLIADIGP 68
           S+EEV    ID           AGRK RLALSID+NDVRALYNW LALSFRGQLIADIGP
Sbjct: 175 SKEEVAPFLIDVCEECEELLVEAGRKYRLALSIDSNDVRALYNWGLALSFRGQLIADIGP 234

Query: 69  GASFEAEIVFLAAIDKFDAMLVKGKVYAPDGIISY 103
           GA+FEAE VFLAAIDKFDAML+KG VYAPD +  +
Sbjct: 235 GAAFEAERVFLAAIDKFDAMLLKGNVYAPDALFRW 269


>Glyma17g12650.1 
          Length = 323

 Score =  134 bits (338), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/94 (69%), Positives = 72/94 (76%)

Query: 10  EEEVTQLFIDXXXXXXXXXXXAGRKCRLALSIDANDVRALYNWSLALSFRGQLIADIGPG 69
           +EEV    ID           AGRK RLALS+D+NDVRALYNW LALSFRGQLIADIGPG
Sbjct: 172 KEEVVPFLIDVCEECEELLVEAGRKYRLALSVDSNDVRALYNWGLALSFRGQLIADIGPG 231

Query: 70  ASFEAEIVFLAAIDKFDAMLVKGKVYAPDGIISY 103
           A+FEAE VFLAAIDKFDAML+KG VYAPD +  +
Sbjct: 232 AAFEAERVFLAAIDKFDAMLLKGNVYAPDALFRW 265