Miyakogusa Predicted Gene
- Lj0g3v0214319.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0214319.1 Non Chatacterized Hit- tr|D7MJ47|D7MJ47_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,68.33,1e-17,
,CUFF.13802.1
(423 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g01420.1 238 1e-62
Glyma11g37460.1 114 2e-25
Glyma19g07780.1 103 3e-22
Glyma05g06370.1 100 3e-21
Glyma16g06930.1 94 3e-19
Glyma01g04440.2 87 4e-17
Glyma01g04440.1 87 4e-17
Glyma08g40370.1 86 7e-17
Glyma18g17280.1 85 2e-16
Glyma14g19950.1 78 2e-14
Glyma07g34140.1 77 3e-14
Glyma20g01740.1 77 4e-14
Glyma07g34140.2 76 8e-14
Glyma12g14880.1 74 4e-13
Glyma10g28050.1 61 3e-09
Glyma18g19700.1 51 3e-06
>Glyma18g01420.1
Length = 295
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 170/356 (47%), Positives = 197/356 (55%), Gaps = 85/356 (23%)
Query: 1 MAESSSTCLVP-----------EGDPIRALSESISFGRFMSERLDWEKWSAFTTHKRYVE 49
MAESS+ CLV +G+PIRAL ESISFGRFM+E LDWEKWS F+ H RYVE
Sbjct: 1 MAESSA-CLVRSFSTPAEATCCDGNPIRALGESISFGRFMTEGLDWEKWSTFS-HNRYVE 58
Query: 50 EAEKYSKPGSVAAKKAYFEAHYKRHAAEKEAALIQEENAQVNGAFDSKTKEGNCTDSSIV 109
EAEKYSKPGSVAAKKAYFEAHYKR AAE+ AALI E NAQ NG F+++ EGNC DSS
Sbjct: 59 EAEKYSKPGSVAAKKAYFEAHYKRAAAERAAALIPEANAQANGTFEAQVHEGNCADSSFG 118
Query: 110 MKSKANSHETANEQLGEEDAVVDCADTNQYNEFDPVEVHKDVSHPCADINHYNEFDPVEV 169
S + ANEQL E A A V ++V
Sbjct: 119 TSSNVANVVAANEQLDNETANYQGA------------VGQEV------------------ 148
Query: 170 HKNLTILEEEKKPEPGTAGEEILAFPVEGEAVNSSPKLSTNSKASKLSHPLDERKASAGV 229
L V+G NSSPKLST + +K S DERKA+
Sbjct: 149 ----------------------LTLSVKGREANSSPKLSTKTVVAKHSRSPDERKAAV-- 184
Query: 230 PPPPRNGINCVSKSKMRVGVRDTVEKKRLTAGSLHMSIDLPSGTRESSKIASAALQSRNG 289
PR+GIN K K VG D+VEKKRL A S+ MSI+LPSGT E+ K + A QSRNG
Sbjct: 185 --LPRSGINSGPKGKKSVG--DSVEKKRLIAQSVRMSINLPSGTGETRKRTATASQSRNG 240
Query: 290 LNSFST-------------SQKSVGGSLEKKRIIAPSLSKSINLSSGTGVSNKTAT 332
N+FST S KSVG S+E KR SL SINL SG G ++KTA+
Sbjct: 241 TNNFSTTAKPRNGINFAAKSMKSVGNSVE-KRPTKRSLHMSINLPSGAGETSKTAS 295
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 15/114 (13%)
Query: 282 AALQSRNGLNSFSTSQKSVGGSLEKKRIIAPSLSKSINLSSGTGVSNK-TATAA------ 334
AA+ R+G+NS +KSVG S+EKKR+IA S+ SINL SGTG + K TATA+
Sbjct: 182 AAVLPRSGINSGPKGKKSVGDSVEKKRLIAQSVRMSINLPSGTGETRKRTATASQSRNGT 241
Query: 335 ------VKSGNGISLASKSMKS--DLVEKKSTARSLHMSINLSSGADKRSKTAS 380
K NGI+ A+KSMKS + VEK+ T RSLHMSINL SGA + SKTAS
Sbjct: 242 NNFSTTAKPRNGINFAAKSMKSVGNSVEKRPTKRSLHMSINLPSGAGETSKTAS 295
>Glyma11g37460.1
Length = 241
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 77/102 (75%), Gaps = 14/102 (13%)
Query: 1 MAESSSTCLV-----------PEGDPIRALSESISFGRFMSERLDWEKWSAFTTHKRYVE 49
MAESS+ CLV EG+PI AL ESISFGRFM+E LDWEKWS F+ H RYVE
Sbjct: 1 MAESSA-CLVRSFSSPAETTCYEGNPILALGESISFGRFMTESLDWEKWSTFS-HNRYVE 58
Query: 50 EAEKYSKPGSVAAKKAYFEAHYKRHAAEKEAAL-IQEENAQV 90
EAEKYSKPGSVAAKKAYFEAHYKR AAE+ AAL + E+N +
Sbjct: 59 EAEKYSKPGSVAAKKAYFEAHYKRKAAERAAALYLVEDNTDI 100
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 183 EPGTAGEEILAFPVEGEAVNSSPKLSTNSKASKLSHPLDERKASAGVPPPPRNGINCVSK 242
E T E+LA PV+G VNSSPKLST + + S DERKA+ PPR+GIN
Sbjct: 105 EEMTLDHEVLALPVKGREVNSSPKLSTKTGVANHSRSFDERKAAV----PPRSGINSGPM 160
Query: 243 SKMRVGVRDTVEKKRLTAGSLHMSIDLPSGTRESSKIASAALQSRNGLNSFSTSQK 298
K VG VEKKRLTA S+HMSI+LPSGT E+ K +AA QSRNGLN+FST +K
Sbjct: 161 GKKSVG--GLVEKKRLTAQSVHMSINLPSGTGETRKRTAAASQSRNGLNNFSTKEK 214
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 282 AALQSRNGLNSFSTSQKSVGGSLEKKRIIAPSLSKSINLSSGTGVSNKTATAAVKSGNGI 341
AA+ R+G+NS +KSVGG +EKKR+ A S+ SINL SGTG + K AA +S NG+
Sbjct: 147 AAVPPRSGINSGPMGKKSVGGLVEKKRLTAQSVHMSINLPSGTGETRKRTAAASQSRNGL 206
>Glyma19g07780.1
Length = 404
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Query: 14 DPIRALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHY 71
+PI AL +SISFGRFMSE L WEKWS+F+ H RYVEEAE+YS+PGSVA KKA+FEAHY
Sbjct: 3 NPIHALEQSISFGRFMSESLAWEKWSSFS-HNRYVEEAERYSRPGSVAQKKAFFEAHY 59
>Glyma05g06370.1
Length = 165
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Query: 14 DPIRALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHY 71
+PI AL +SISFGRFMSE L WEKWS+F+ H RYVEEAE+YS+PGSVA KKA+FEAHY
Sbjct: 3 NPIHALGQSISFGRFMSESLAWEKWSSFS-HNRYVEEAERYSRPGSVAQKKAFFEAHY 59
>Glyma16g06930.1
Length = 499
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 14 DPIRALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHY 71
+P AL +S+SFGRFM E L WEKWS F+ H RYVEEAE++++PGSVA KKA+FEAHY
Sbjct: 36 NPNNALGQSVSFGRFMPESLAWEKWSTFS-HNRYVEEAERFTRPGSVAQKKAFFEAHY 92
>Glyma01g04440.2
Length = 490
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 18 ALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAE 77
AL S+SFGRF ++ L WE+WS+F+ +K Y+EE EK + PGSVA KKAYFEAHYK+ AA
Sbjct: 26 ALQVSVSFGRFENDSLSWERWSSFSPNK-YLEEVEKCATPGSVAQKKAYFEAHYKKVAAR 84
Query: 78 KEAALIQEENAQVNGAFDSKTKEG 101
K A L+ +E + +F S+ G
Sbjct: 85 K-AELLAQEKQREKDSFGSEEHSG 107
>Glyma01g04440.1
Length = 490
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 18 ALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAE 77
AL S+SFGRF ++ L WE+WS+F+ +K Y+EE EK + PGSVA KKAYFEAHYK+ AA
Sbjct: 26 ALQVSVSFGRFENDSLSWERWSSFSPNK-YLEEVEKCATPGSVAQKKAYFEAHYKKVAAR 84
Query: 78 KEAALIQEENAQVNGAFDSKTKEG 101
K A L+ +E + +F S+ G
Sbjct: 85 K-AELLAQEKQREKDSFGSEEHSG 107
>Glyma08g40370.1
Length = 481
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 18 ALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAE 77
AL S+SFGRF ++ L WEKWSAF+ +K Y+EE EK + PGSVA KKAYFEAHYK AA
Sbjct: 10 ALQVSVSFGRFENDSLSWEKWSAFSPNK-YLEEVEKCATPGSVAQKKAYFEAHYKNIAAR 68
Query: 78 KEAALIQ 84
K L Q
Sbjct: 69 KAELLAQ 75
>Glyma18g17280.1
Length = 501
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 18 ALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAE 77
AL S+SFGRF ++ L WEKWSAF+ +K Y+EE EK + PGSVA KKAYFEAHYK AA
Sbjct: 10 ALQVSVSFGRFENDSLSWEKWSAFSPNK-YLEEVEKCATPGSVAQKKAYFEAHYKNVAAR 68
Query: 78 KEAALIQ 84
K L Q
Sbjct: 69 KAELLAQ 75
>Glyma14g19950.1
Length = 371
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 23 ISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAEKEAAL 82
+S GRF ++ L WE+WS F+ +K Y+EE EK + PGS+A KKAYFEAHYK+ AA K A L
Sbjct: 16 VSVGRFENDSLSWERWSFFSPNK-YLEEVEKCATPGSMAQKKAYFEAHYKKVAARK-AEL 73
Query: 83 IQEENAQVNGAFDSKTKEGNCTDSSIVM 110
+ +E + +F S +E N D S +M
Sbjct: 74 LAQEKQREKDSFGS--EEHNGIDLSGLM 99
>Glyma07g34140.1
Length = 590
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 20 SESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKR 73
S SISFGRF +E L WE+ S+F+ H RY+EE EK +KPGSV KKAYFEAH+KR
Sbjct: 7 SGSISFGRFENEPLSWERRSSFS-HNRYLEEVEKCAKPGSVIEKKAYFEAHFKR 59
>Glyma20g01740.1
Length = 642
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 20 SESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKR 73
S SISFGRF +E L WE+ S+F+ H RY+EE EK SKPGSV KKAYFEAH+K+
Sbjct: 20 SGSISFGRFENETLSWERRSSFS-HNRYLEEVEKCSKPGSVIEKKAYFEAHFKK 72
>Glyma07g34140.2
Length = 392
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 22 SISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKR 73
SISFGRF +E L WE+ S+F+ H RY+EE EK +KPGSV KKAYFEAH+KR
Sbjct: 22 SISFGRFENEPLSWERRSSFS-HNRYLEEVEKCAKPGSVIEKKAYFEAHFKR 72
>Glyma12g14880.1
Length = 178
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 23 ISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKR 73
ISFGRF +E L WE+ S+F+ H RY+EE EK SKPGSV KKAYFEAH+KR
Sbjct: 11 ISFGRFENEPLSWERRSSFS-HNRYLEEVEKCSKPGSVIEKKAYFEAHFKR 60
>Glyma10g28050.1
Length = 210
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 13/66 (19%)
Query: 19 LSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAEK 78
L S+SFGRF ++ L WEKWSAF+ +K Y+EE KKAYFEAHYK AA K
Sbjct: 11 LQVSVSFGRFENDSLSWEKWSAFSPNK-YLEE------------KKAYFEAHYKNVAARK 57
Query: 79 EAALIQ 84
L Q
Sbjct: 58 AELLAQ 63
>Glyma18g19700.1
Length = 250
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 35 WEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRHAAEKEAALIQE 85
+E+WS+F+ +K Y+EE EK + P SVA KKAYF AH K+ A K L QE
Sbjct: 25 FERWSSFSPNK-YLEEVEKCATPRSVAQKKAYFGAHSKKVVARKAELLAQE 74