Miyakogusa Predicted Gene

Lj0g3v0213779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213779.1 tr|B9RD17|B9RD17_RICCO Actin-related protein 2/3
complex subunit 5 OS=Ricinus communis GN=RCOM_16088,76.19,6e-19,ARP2/3
COMPLEX 16 KD SUBUNIT (P16-ARC),ARP2/3 complex 16kDa subunit
(p16-Arc); Arp2/3 complex 16 kDa,CUFF.13758.1
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g14260.1                                                       266   5e-72
Glyma03g26690.1                                                       259   7e-70
Glyma07g14260.2                                                       175   2e-44

>Glyma07g14260.1 
          Length = 135

 Score =  266 bits (680), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 126/135 (93%), Positives = 131/135 (97%)

Query: 1   MAGAEGFVEADNAEAIIARIEHKSRKIESLLKQYKPVEALKTALEGTYAMTSDERCKSAH 60
           MAGAEGFVEADNAEAII RIEHKSRKIE+LLKQYKPVEALKTALEGTYA+  DERCKSAH
Sbjct: 1   MAGAEGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAIIGDERCKSAH 60

Query: 61  WIAVHRALMAIKDVDGMLSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAG 120
           W+ VHRA+MAIKDVDGMLSSLDPEYYDILMKYLYRGL+TGDRPTCDQCLRIHEKLTEKAG
Sbjct: 61  WLVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQCLRIHEKLTEKAG 120

Query: 121 LGCILRFLTDTVNTV 135
           LGCILRFLTDTVNTV
Sbjct: 121 LGCILRFLTDTVNTV 135


>Glyma03g26690.1 
          Length = 135

 Score =  259 bits (661), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 122/135 (90%), Positives = 129/135 (95%)

Query: 1   MAGAEGFVEADNAEAIIARIEHKSRKIESLLKQYKPVEALKTALEGTYAMTSDERCKSAH 60
           MAGA+GFVEADNAEAII RIEHKSRKIE+LLKQYKPVEALKTALEGT+A+  DERCKSAH
Sbjct: 1   MAGAKGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTFAIIGDERCKSAH 60

Query: 61  WIAVHRALMAIKDVDGMLSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAG 120
           W+ VHRA+MAIKDVDGMLSSLDPEYYDILMKYLYRGL+TGDRPTCDQCL IHEKLTEKAG
Sbjct: 61  WLVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQCLLIHEKLTEKAG 120

Query: 121 LGCILRFLTDTVNTV 135
           LGCILRFLTD VNTV
Sbjct: 121 LGCILRFLTDIVNTV 135


>Glyma07g14260.2 
          Length = 98

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 83/91 (91%), Positives = 87/91 (95%)

Query: 1  MAGAEGFVEADNAEAIIARIEHKSRKIESLLKQYKPVEALKTALEGTYAMTSDERCKSAH 60
          MAGAEGFVEADNAEAII RIEHKSRKIE+LLKQYKPVEALKTALEGTYA+  DERCKSAH
Sbjct: 1  MAGAEGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAIIGDERCKSAH 60

Query: 61 WIAVHRALMAIKDVDGMLSSLDPEYYDILMK 91
          W+ VHRA+MAIKDVDGMLSSLDPEYYDILMK
Sbjct: 61 WLVVHRAIMAIKDVDGMLSSLDPEYYDILMK 91