Miyakogusa Predicted Gene

Lj0g3v0213659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213659.1 tr|G7IK10|G7IK10_MEDTR Separin OS=Medicago
truncatula GN=MTR_2g007790 PE=4 SV=1,53.19,0.000000000000002,
,CUFF.13744.1
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g05350.1                                                       112   1e-25
Glyma08g19650.1                                                        60   4e-10
Glyma06g42290.1                                                        55   2e-08

>Glyma15g05350.1 
          Length = 2053

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/95 (70%), Positives = 71/95 (74%), Gaps = 9/95 (9%)

Query: 1  MASPSPTEASLISKLQSSDSTGIHALVSDYLRPFSDL---NNSNSNQTLIRSLAKRFLPF 57
          MASPS  E+SLISKLQSSDS GIHALVSDYLRP SDL     SN +QTLIRSLAKRFL F
Sbjct: 2  MASPS--ESSLISKLQSSDSPGIHALVSDYLRPLSDLKPTKKSNPDQTLIRSLAKRFLSF 59

Query: 58 LNTSLSILPKRLPRI--STNLID--EFFLVYSLCL 88
          LN SLSILPKRLP +  S N +   E   VY LCL
Sbjct: 60 LNASLSILPKRLPEVSKSNNAVSLLELLRVYRLCL 94


>Glyma08g19650.1 
          Length = 1884

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 6/54 (11%)

Query: 41 NSNQTLIRSLAKRFLPFLNTSLSILPKRLPRIS-TNLIDEFFL-----VYSLCL 88
          N +QTLIRSLAKRFL FLN SLS+LPKRLP +S +N  D  FL     VY LCL
Sbjct: 8  NPDQTLIRSLAKRFLSFLNASLSLLPKRLPEVSKSNDSDAVFLLELLRVYRLCL 61


>Glyma06g42290.1 
          Length = 160

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 4/55 (7%)

Query: 38 NNSNSNQTLIRSLAKRFLPFLNTSLSILPKRLPRIST--NLID--EFFLVYSLCL 88
            SN +QTLIRSL+KRFL FL  SLSILPK  P +S   N I   E   +Y LCL
Sbjct: 5  KKSNPDQTLIRSLSKRFLSFLKASLSILPKWFPEVSKSNNAISLLELLCIYKLCL 59