Miyakogusa Predicted Gene
- Lj0g3v0212559.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0212559.1 Non Chatacterized Hit- tr|I1M8U7|I1M8U7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,70.73,0.0000000006,seg,NULL,CUFF.13676.1
(66 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g09920.1 54 4e-08
Glyma06g04990.1 51 3e-07
Glyma02g03550.1 50 6e-07
Glyma02g03550.3 50 6e-07
Glyma02g03550.2 50 6e-07
Glyma02g03550.4 50 6e-07
Glyma01g04160.1 49 1e-06
Glyma04g04890.1 49 1e-06
Glyma08g40100.1 48 3e-06
Glyma18g18060.1 48 3e-06
Glyma05g01900.2 46 7e-06
Glyma05g01900.1 46 7e-06
Glyma17g10000.3 46 7e-06
Glyma17g10000.2 46 7e-06
Glyma17g10000.1 46 7e-06
>Glyma14g09920.1
Length = 529
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 25/31 (80%)
Query: 36 VQPHPVKEQLPGVQYCINSPPPWRPYHVLYF 66
V+PH V+EQLPGVQYCI SPPPWR +L F
Sbjct: 29 VKPHAVQEQLPGVQYCIKSPPPWREALLLGF 59
>Glyma06g04990.1
Length = 531
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Query: 37 QPHPVKEQLPGVQYCINSPPPWRPYHVL 64
QPHPV EQLP V+YCINSPPPW P+ +L
Sbjct: 24 QPHPVMEQLPDVEYCINSPPPW-PHALL 50
>Glyma02g03550.1
Length = 531
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 36 VQPHPVKEQLPGVQYCINSPPPW 58
+QPHPVK+QLP V YCI SPPPW
Sbjct: 13 LQPHPVKDQLPNVSYCITSPPPW 35
>Glyma02g03550.3
Length = 416
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 36 VQPHPVKEQLPGVQYCINSPPPW 58
+QPHPVK+QLP V YCI SPPPW
Sbjct: 13 LQPHPVKDQLPNVSYCITSPPPW 35
>Glyma02g03550.2
Length = 528
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 36 VQPHPVKEQLPGVQYCINSPPPW 58
+QPHPVK+QLP V YCI SPPPW
Sbjct: 13 LQPHPVKDQLPNVSYCITSPPPW 35
>Glyma02g03550.4
Length = 410
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 36 VQPHPVKEQLPGVQYCINSPPPW 58
+QPHPVK+QLP V YCI SPPPW
Sbjct: 13 LQPHPVKDQLPNVSYCITSPPPW 35
>Glyma01g04160.1
Length = 531
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 36 VQPHPVKEQLPGVQYCINSPPPW 58
+QPHPVK+QLP V YCI SPPPW
Sbjct: 13 LQPHPVKDQLPNVSYCITSPPPW 35
>Glyma04g04890.1
Length = 548
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
+PHPV EQLP V YCINSPPPW
Sbjct: 29 EPHPVMEQLPDVHYCINSPPPW 50
>Glyma08g40100.1
Length = 533
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 19/22 (86%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHPVK+QLP V +CI SPPPW
Sbjct: 16 QPHPVKDQLPNVSFCITSPPPW 37
>Glyma18g18060.1
Length = 533
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 19/22 (86%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHPVK+QLP V +CI SPPPW
Sbjct: 16 QPHPVKDQLPNVSFCITSPPPW 37
>Glyma05g01900.2
Length = 533
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHP K+QLP V YCI SPPPW
Sbjct: 16 QPHPPKDQLPNVSYCITSPPPW 37
>Glyma05g01900.1
Length = 533
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHP K+QLP V YCI SPPPW
Sbjct: 16 QPHPPKDQLPNVSYCITSPPPW 37
>Glyma17g10000.3
Length = 533
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHP K+QLP V YCI SPPPW
Sbjct: 16 QPHPPKDQLPNVSYCITSPPPW 37
>Glyma17g10000.2
Length = 533
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHP K+QLP V YCI SPPPW
Sbjct: 16 QPHPPKDQLPNVSYCITSPPPW 37
>Glyma17g10000.1
Length = 534
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 37 QPHPVKEQLPGVQYCINSPPPW 58
QPHP K+QLP V YCI SPPPW
Sbjct: 16 QPHPPKDQLPNVSYCITSPPPW 37