Miyakogusa Predicted Gene

Lj0g3v0210699.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210699.1 tr|B9MZV3|B9MZV3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595599 PE=4
SV=1,58.42,2e-17,seg,NULL,CUFF.13534.1
         (347 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37790.1                                                       296   3e-80
Glyma10g29510.1                                                       254   1e-67
Glyma03g39770.1                                                       159   5e-39
Glyma19g42350.1                                                       155   6e-38

>Glyma20g37790.1 
          Length = 382

 Score =  296 bits (757), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 191/350 (54%), Positives = 213/350 (60%), Gaps = 77/350 (22%)

Query: 1   MSLPAMLVGETVGEILQATQFAREIVSAVGNKFASEDPKTPMSQRPNQKASPESNTQLKA 60
           MSLPAMLVGETVGEILQA+QFAREIVSAVG K   EDPKTPMSQR N+K   E NTQL+A
Sbjct: 99  MSLPAMLVGETVGEILQASQFAREIVSAVGKKTDPEDPKTPMSQRSNKKVELE-NTQLRA 157

Query: 61  RRKKEKQTK--NDSPPSLQRARSRINFKVSPPKVRELDLQNHRYLANRVSPRNKPWARKT 118
           RRKKEKQTK  ND  PSLQRARSRINFKVSPPKVRE D + +RY+ANRVSPRN+PW RKT
Sbjct: 158 RRKKEKQTKAQNDGSPSLQRARSRINFKVSPPKVREFDKERNRYMANRVSPRNRPWTRKT 217

Query: 119 VLFPNPLFLXXXXXXXXXXXXXFCKTRSPIISRNRG-TPHKFLIKTXXXXXXXXXXXXXX 177
           VLFPNPLFL             FCKTRSPII+RNRG T HKFLIK+              
Sbjct: 218 VLFPNPLFL----STHSSSQQQFCKTRSPIITRNRGTTSHKFLIKSPS------------ 261

Query: 178 XXXHVSLSPTRPAGLNKS-SP--TRNR-GTPHKFLIKSPTLTSKVQAQIKXXXXXXXXXX 233
                  SP+ P   +K+ SP  TRNR GTPHKFLIKSP+  SK Q QIK          
Sbjct: 262 -------SPSGPQQFSKTRSPVITRNRGGTPHKFLIKSPSSASKFQVQIK---------- 304

Query: 234 XXXXXXXXXXTRIRGTPHKFLIKSPTLTSKIQVRSPRALSISPIRPANLGRNSQKXXXXX 293
                                            +SP  +SISP +PA L R+  K     
Sbjct: 305 ---------------------------------KSPPTVSISPTKPARLSRSPPKRSTST 331

Query: 294 XXX--XXXXXXXIASRLASLSPLKRKKTVQKSDGLFVSGLKQRPASTVRL 341
                       IASRL SLSPL+ +KTVQK+DG FVSGLKQRP S+V+ 
Sbjct: 332 ASKFRRSFSPSRIASRLVSLSPLRTRKTVQKNDG-FVSGLKQRPLSSVQY 380


>Glyma10g29510.1 
          Length = 353

 Score =  254 bits (649), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/218 (65%), Positives = 157/218 (72%), Gaps = 17/218 (7%)

Query: 1   MSLPAMLVGETVGEILQATQFAREIVSAVGNKFASEDPKTPMSQRPNQKASPESNTQLKA 60
           MSLPAMLVGETVGEILQA+QFAREIV+AVG K   EDPKTPMSQR N+KA  E NTQL+A
Sbjct: 99  MSLPAMLVGETVGEILQASQFAREIVTAVGKKTPQEDPKTPMSQRSNKKAELE-NTQLRA 157

Query: 61  RRKKEKQTK--NDSPPSLQRARSRINFKVSPPKVRELDLQNHRYLANRVSPRNKPWARKT 118
           RRKKEKQTK  ND  PSLQRARSRINFKVSPPKVRE D +++RY+ANRVSPRNKPWARKT
Sbjct: 158 RRKKEKQTKAQNDGSPSLQRARSRINFKVSPPKVREFDKESNRYMANRVSPRNKPWARKT 217

Query: 119 VLFPNPLFLXXXXXXXXXXXXXFCKTRSPIISRNR---------GTPHKFLIKTXXXXXX 169
           VLFPNPLFL             FCKTRSPII+RNR         GTPHKFLIK+      
Sbjct: 218 VLFPNPLFL----STHSSSQQQFCKTRSPIITRNRGTTTSHKGGGTPHKFLIKSPTSATK 273

Query: 170 XXXXXXXXXXXHVSLSPTRPAGLNKSSPTRNRGTPHKF 207
                       VS+SPT+PA L++S P R+  T  KF
Sbjct: 274 VQVQIKNSPPT-VSISPTKPARLSRSPPKRSTSTASKF 310



 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 248 GTPHKFLIKSPTLTSKIQVR---SPRALSISPIRPANLGRNSQKXXXXXXXX--XXXXXX 302
           GTPHKFLIKSPT  +K+QV+   SP  +SISP +PA L R+  K                
Sbjct: 258 GTPHKFLIKSPTSATKVQVQIKNSPPTVSISPTKPARLSRSPPKRSTSTASKFRRSFSPS 317

Query: 303 XIASRLASLSPLKRKKTVQKSDGL 326
            IASRL SLSPL+ +KT   S  +
Sbjct: 318 RIASRLVSLSPLRTRKTCPASSSV 341


>Glyma03g39770.1 
          Length = 312

 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 112/165 (67%), Gaps = 16/165 (9%)

Query: 1   MSLPAMLVGETVGEILQATQFAREIVSAVGNKFASEDPKTPMSQRPNQKASPESNTQLKA 60
           MSLPAMLVGETVGEI +A+QFAREIVSAV  K A+++PKTP+SQR NQK   E NTQL A
Sbjct: 102 MSLPAMLVGETVGEIYKASQFAREIVSAVSRKTATKEPKTPLSQRSNQKVDLE-NTQLNA 160

Query: 61  RRKKEKQTK--NDSPPSLQRARSRINFKVSPPKVRELDLQNHRYLANRVSPRNKPWARKT 118
           RR+KEKQ K  +D+PP  QRARSRINFK+SPPK  +    N    +NR +        KT
Sbjct: 161 RRRKEKQIKPVSDTPPP-QRARSRINFKISPPKAFDKKNDNKACASNRTN--------KT 211

Query: 119 VLFPNPLFLXXXXXXXXXXXXXFCKTRSPIISRNRGTPHKFLIKT 163
           +L P PLFL             FC+T+SP+ISRN GT  K LIK+
Sbjct: 212 MLVPKPLFL----STHSSRQQQFCQTKSPVISRNIGTQQKCLIKS 252


>Glyma19g42350.1 
          Length = 389

 Score =  155 bits (392), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 112/165 (67%), Gaps = 12/165 (7%)

Query: 1   MSLPAMLVGETVGEILQATQFAREIVSAVGNKFASEDPKTPMSQRPNQKASPESNTQLKA 60
           MSLP+MLVGETVGEIL+A+QFA EIVSAV  K A+++PKTP SQR NQK   E NTQL A
Sbjct: 103 MSLPSMLVGETVGEILKASQFASEIVSAVSRKTATKEPKTPQSQRSNQKVDTE-NTQLNA 161

Query: 61  RRKKEKQTK--NDSPPSLQRARSRINFKVSPPK-VRELDLQ-NHRYLANRVSPRNKPWAR 116
           RR+KEKQ K  +D+PPS Q ARSRINFKVSPPK   E D + N++ L NR    +     
Sbjct: 162 RRRKEKQIKPLSDTPPS-QWARSRINFKVSPPKRTVEFDKENNNKCLPNRACASSS--TN 218

Query: 117 KTVLFPNPLFLXXXXXXXXXXXXXFCKTRSPIISRNRGTPHKFLI 161
           KTVL P PLFL             FCKT+S +ISRN GT  K LI
Sbjct: 219 KTVLVPKPLFL----STHSSRQQLFCKTKSHVISRNIGTQQKCLI 259