Miyakogusa Predicted Gene

Lj0g3v0210389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210389.1 Non Chatacterized Hit- tr|I1MB74|I1MB74_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3265
PE=,55.56,0.00002,DUF1296,Protein of unknown function
DUF1296,CUFF.13504.1
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g36880.1                                                        54   5e-08
Glyma02g38790.1                                                        53   6e-08

>Glyma14g36880.1 
          Length = 838

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 22 SGGGLRVLISNSVRKTIQNIKE-TRVREEDEIYAMLK-FSIFPSETAQKLLLHATNPEDT 79
          SG G R  I +SVR+TIQNIKE T    E++IYAMLK  S+ P+ET QKLLL  T  E  
Sbjct: 2  SGAGFRASIPSSVRRTIQNIKEITGNHSEEDIYAMLKECSMDPNETTQKLLLQDTFHEVK 61

Query: 80 MKQ 82
           K+
Sbjct: 62 RKK 64


>Glyma02g38790.1 
          Length = 846

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 22 SGGGLRVLISNSVRKTIQNIKE-TRVREEDEIYAMLK-FSIFPSETAQKLLLHATNPEDT 79
          SG G R  I +SVR+TIQNIKE T    E+++YAMLK  S+ P+ET QKLLL  T  E  
Sbjct: 2  SGAGFRASIPSSVRRTIQNIKEITGNHSEEDVYAMLKECSMDPNETTQKLLLQDTFHEVK 61

Query: 80 MKQ 82
           K+
Sbjct: 62 RKK 64