Miyakogusa Predicted Gene

Lj0g3v0210329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210329.1 tr|F2CSI2|F2CSI2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,40.24,1e-17,seg,NULL; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAS-ASSOCIATED
PROTEIN,NULL,CUFF.13501.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g31660.1                                                        91   1e-18
Glyma20g35940.1                                                        82   5e-16

>Glyma10g31660.1 
          Length = 465

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 63/164 (38%), Gaps = 4/164 (2%)

Query: 1   MADVADKLAYFQAITGLEDPDLCTEILAAHGWDLELAISSFXXXXXXXXXXXXXXXXXX- 59
           M DVADKLAYFQAITGLEDPDLCTEILAAH WDLELAIS+F                   
Sbjct: 1   MGDVADKLAYFQAITGLEDPDLCTEILAAHNWDLELAISTFTSSSNPSSTDTPLQPHPND 60

Query: 60  ---XXXXEHLLXXXXXXXXXXGLAWKLIKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 116
                                GLAWKLI LP                             
Sbjct: 61  HVPSASNPQPQPQHQHPPPPPGLAWKLITLPVSVISGSLGLVSGAIGLGLWAAGGVLSYS 120

Query: 117 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMDFVAAFERDYGS 160
                                        EAMDFVAAFERDYGS
Sbjct: 121 LGLVGLGSPSGSGSGSSSAPLVSVTAAASEAMDFVAAFERDYGS 164


>Glyma20g35940.1 
          Length = 430

 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 39/41 (95%)

Query: 1  MADVADKLAYFQAITGLEDPDLCTEILAAHGWDLELAISSF 41
          M DVADKLAYFQAITGLEDP+LCTEILAAH WDLELAIS+F
Sbjct: 1  MGDVADKLAYFQAITGLEDPELCTEILAAHNWDLELAISTF 41