Miyakogusa Predicted Gene
- Lj0g3v0210279.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0210279.1 Non Chatacterized Hit- tr|I1M4B4|I1M4B4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.29,0,Lycopene_cycl,Lycopene cyclase-type, FAD-binding;
FAD/NAD(P)-binding domain,NULL; seg,NULL; no descr,CUFF.13499.1
(502 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g39150.1 792 0.0
Glyma12g31160.1 575 e-164
Glyma19g31220.1 530 e-150
Glyma03g28470.1 521 e-148
Glyma09g07590.1 270 3e-72
Glyma15g18810.1 265 7e-71
Glyma04g37200.1 82 1e-15
>Glyma13g39150.1
Length = 493
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/502 (76%), Positives = 421/502 (83%), Gaps = 9/502 (1%)
Query: 1 MDTRFLLFSPPPPTNLHHRHRLLRSPKPSTTIHHNXXXXXXXXXXXXXXXIHSKFGNFLD 60
M T F+LFSPPP H L +P P HH SKFGNFLD
Sbjct: 1 MGTSFMLFSPPPLLKPHQVP--LTTPFPLPQTHHTASRNKRVHST-------SKFGNFLD 51
Query: 61 MMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDPLSI 120
PE +PE+LDFDLPWCHPSDR RFDVIIIGAGPAG RLAEQVS YG+KVCCVDPDPLS+
Sbjct: 52 FKPENKPESLDFDLPWCHPSDRNRFDVIIIGAGPAGTRLAEQVSLYGVKVCCVDPDPLSV 111
Query: 121 WPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGC 180
WPNNYGVW DEFESLGLEDCLDKTW MA V++D+GKTKYLDRCYGRV R+KLKERLV+GC
Sbjct: 112 WPNNYGVWRDEFESLGLEDCLDKTWPMACVYVDDGKTKYLDRCYGRVGRRKLKERLVQGC 171
Query: 181 VFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCGCQI 240
V NGVRFHKA+ W++ HQEFES +LCDDG ELKGSL+VDASGF S+FV YDKVR+ G QI
Sbjct: 172 VSNGVRFHKAKVWQVQHQEFESKVLCDDGVELKGSLVVDASGFASNFVAYDKVRHHGFQI 231
Query: 241 AHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEET 300
AHGVLAEV+DHPFDLDKMVLMDWRDSHLGNEP LRASN + PTFLYAMPFSSNL+FLEET
Sbjct: 232 AHGVLAEVDDHPFDLDKMVLMDWRDSHLGNEPYLRASNSRFPTFLYAMPFSSNLIFLEET 291
Query: 301 SLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSG 360
SLVSRPVLSYMEVKRRMVARLRHLG+RVKRVLEDEKCLIPMGGPLP IPQ VMAIGG SG
Sbjct: 292 SLVSRPVLSYMEVKRRMVARLRHLGIRVKRVLEDEKCLIPMGGPLPRIPQEVMAIGGTSG 351
Query: 361 VVHPSTGYSVARSMXXXXXXXXXXXESLGSTRMIRGKPLYAKVWNSLWPIESRLNREFYS 420
VVHPSTGY VAR+M + LGSTRMIRGK L+ KVWNS+WPIE+RL REFYS
Sbjct: 352 VVHPSTGYMVARTMAVAPVVAFAITQCLGSTRMIRGKQLHDKVWNSMWPIENRLVREFYS 411
Query: 421 FGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFD 480
FGMETLLKLDLNG+R FFDAFF+LKPY WQGFLSSRL+L EL+WLS+SLFGHASNPSRFD
Sbjct: 412 FGMETLLKLDLNGSRSFFDAFFNLKPYYWQGFLSSRLTLNELLWLSISLFGHASNPSRFD 471
Query: 481 IVTKCPVPLAKMMGNMTLDSIG 502
IVTKCPVP+AKM+GN+ L+ IG
Sbjct: 472 IVTKCPVPMAKMVGNIALEYIG 493
>Glyma12g31160.1
Length = 408
Score = 575 bits (1482), Expect = e-164, Method: Compositional matrix adjust.
Identities = 294/423 (69%), Positives = 323/423 (76%), Gaps = 49/423 (11%)
Query: 80 SDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDPLSIWPNNYGVWCDEFESLGLED 139
SDRA FDVIIIGA PAG RLAEQVS YG+KVCCVDP+PL FES GLED
Sbjct: 35 SDRAHFDVIIIGADPAGTRLAEQVSLYGVKVCCVDPEPL------------HFESPGLED 82
Query: 140 CLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVFNGVRFHKAQAWKIVHQE 199
CLDKTW MA V++++GK+K +KLKERLVEGCV NGVRFHKA+ W++ HQE
Sbjct: 83 CLDKTWPMAFVYVNDGKSK-----------RKLKERLVEGCVSNGVRFHKAKVWQVEHQE 131
Query: 200 FESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCGCQIAHGVLAEVEDHPFDLDKMV 259
FES KGSL+VD SGFGS FV YDKV+N G QIAH VLAEV+DHPFDLDKMV
Sbjct: 132 FES----------KGSLVVDVSGFGSSFVAYDKVKNHGFQIAHSVLAEVDDHPFDLDKMV 181
Query: 260 LMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVKRRMVA 319
L+DWRDSHLGNEP LRAS+ + PTFLYAMPFSSNL+FLEETSLVSRPVL YMEVKRRM
Sbjct: 182 LVDWRDSHLGNEPYLRASSSRFPTFLYAMPFSSNLIFLEETSLVSRPVLYYMEVKRRM-- 239
Query: 320 RLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSMXXXXX 379
DEKCLIPMGGPLP PQ VMAIG SGVVHPSTGY VAR+M
Sbjct: 240 --------------DEKCLIPMGGPLPRTPQEVMAIGSTSGVVHPSTGYMVARTMAVAPV 285
Query: 380 XXXXXXESLGSTRMIRGKPLYAKVWNSLWPIESRLNREFYSFGMETLLKLDLNGTRRFFD 439
E LGSTRMIRGK L KV NS+WPIE+RL REFYS+GMETLLK+DLNG R FFD
Sbjct: 286 VAFAIAECLGSTRMIRGKQLSGKVLNSMWPIENRLVREFYSYGMETLLKVDLNGNRSFFD 345
Query: 440 AFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFDIVTKCPVPLAKMMGNMTLD 499
AFFDLKPY WQGFLSSRL+L EL+WLS+SLFGHASNPSRFDI+TKC VPLAKMMGN+ L+
Sbjct: 346 AFFDLKPYYWQGFLSSRLTLNELVWLSISLFGHASNPSRFDILTKCHVPLAKMMGNIALE 405
Query: 500 SIG 502
IG
Sbjct: 406 YIG 408
>Glyma19g31220.1
Length = 507
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 242/443 (54%), Positives = 329/443 (74%)
Query: 58 FLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDP 117
L+++PE++ E LDF+LP S A D+ ++G GPAG+ +A+QVS G+ VC +DP+P
Sbjct: 64 LLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNP 123
Query: 118 LSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLV 177
IWPNNYGVW DEFE++ L DCLD TW+ A V ID+ K LDR YGRV+RK LK +++
Sbjct: 124 RLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKTKKDLDRPYGRVNRKLLKSKML 183
Query: 178 EGCVFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCG 237
+ C+ NGV+FH+A+ K++H+E +S+L+C+DG ++ ++++DA+GF V+YDK+ N G
Sbjct: 184 QKCISNGVKFHQAKVIKVIHEETKSLLICNDGVTIQATVVLDATGFSRCLVQYDKLYNPG 243
Query: 238 CQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFL 297
Q+A+G+LAEV++HPFD+DKM+ MDWRDSHL N+ L+ N ++PTFLYAMPFSS +FL
Sbjct: 244 YQVAYGILAEVDEHPFDVDKMLFMDWRDSHLNNDMELKQRNCRIPTFLYAMPFSSTKIFL 303
Query: 298 EETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGG 357
EETSLV+RP L +++ RMVARL+HLG+RVK + EDE+C+IPMGGPLP++PQ V+ IGG
Sbjct: 304 EETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEQCVIPMGGPLPVLPQRVVGIGG 363
Query: 358 NSGVVHPSTGYSVARSMXXXXXXXXXXXESLGSTRMIRGKPLYAKVWNSLWPIESRLNRE 417
+G+VHPSTGY VAR++ + LGS R G A+VW LWPI+ R RE
Sbjct: 364 TAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSDRGFSGGETSAQVWKDLWPIQRRRQRE 423
Query: 418 FYSFGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPS 477
F+ FGM+ LLKLDL GTRRFFDAFFDL+P+ W GFLSSRL L ELI+ LSLF +ASN S
Sbjct: 424 FFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELIFFGLSLFSYASNTS 483
Query: 478 RFDIVTKCPVPLAKMMGNMTLDS 500
R +I+ K +PL M+ N+ D+
Sbjct: 484 RIEIMAKGTLPLVNMINNLVKDT 506
>Glyma03g28470.1
Length = 507
Score = 521 bits (1341), Expect = e-148, Method: Compositional matrix adjust.
Identities = 238/443 (53%), Positives = 325/443 (73%)
Query: 58 FLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDP 117
L+++PE++ E LDF+LP S A D+ ++G GPAG+ +A+QVS G+ VC +DP+P
Sbjct: 64 LLELVPEFKKENLDFELPLYDSSKGAMVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNP 123
Query: 118 LSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLV 177
IWPNNYGVW DEFE++ L DCLD W+ A V ID+ K LDR YGRV+RK LK +++
Sbjct: 124 RLIWPNNYGVWVDEFEAMDLLDCLDTIWSGAVVFIDDKTKKDLDRPYGRVNRKLLKSKML 183
Query: 178 EGCVFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCG 237
+ C+ NGV+FH+A+ K++H+E +S+L+C+DG + ++++DA+GF V+YDK N G
Sbjct: 184 QKCISNGVKFHQAKVIKVIHEEAKSLLICNDGVTVHATVVLDATGFSRCLVQYDKPYNPG 243
Query: 238 CQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFL 297
Q+A+G+LAEV++HPFD+DKM+ MDWRDSHL N+ L+ N ++PTFLYAMPFSS +FL
Sbjct: 244 YQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDNDMELKQRNSRIPTFLYAMPFSSTKIFL 303
Query: 298 EETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGG 357
EETSLV+RP L +++ RM ARL+HLG+RVK + EDE C+IPMGGPLP++PQ V+ IGG
Sbjct: 304 EETSLVARPGLRMDDIQERMAARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGG 363
Query: 358 NSGVVHPSTGYSVARSMXXXXXXXXXXXESLGSTRMIRGKPLYAKVWNSLWPIESRLNRE 417
+G+VHPSTGY VAR++ + LGS R G + A+VW LWPI+ R RE
Sbjct: 364 TAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSDRGFSGDEISAQVWKDLWPIQRRRQRE 423
Query: 418 FYSFGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPS 477
F+ FGM+ LLKLDL GT+RFFDAFFDL+P+ W GFLSSRL L EL++ LSLF +ASN S
Sbjct: 424 FFCFGMDILLKLDLPGTKRFFDAFFDLEPHYWHGFLSSRLFLHELLFFGLSLFSYASNTS 483
Query: 478 RFDIVTKCPVPLAKMMGNMTLDS 500
R +I+ K +PL M+ N+ D+
Sbjct: 484 RVEIMAKGTLPLVNMINNLVKDT 506
>Glyma09g07590.1
Length = 532
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 226/409 (55%), Gaps = 17/409 (4%)
Query: 85 FDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPD-PLSIWPNNYGVWCDEFESLGLEDCLDK 143
D+++IG GPAG+ LA + ++ G+KV + PD P + NNYGVW DEF+ LGLE C++
Sbjct: 111 LDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFT---NNYGVWEDEFKDLGLEGCIEH 167
Query: 144 TWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVFNGVRFHKAQAWKIVH-QEFES 202
W V++D ++ R YGRVSR L E L+ CV +GV + ++ ++ S
Sbjct: 168 VWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVESVIETSNGHS 227
Query: 203 MLLCDDGTELKGSLIVDASGFGSDFVKYDKVR--NCGCQIAHGVLAEVEDHPFDLDKMVL 260
++C+ + L+ ASG S + +V Q A+GV EVE++P+D + MV
Sbjct: 228 HVVCEYDVVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVF 287
Query: 261 MDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVKRRMVAR 320
MD+RD + N++ PTFLYAMP S VF EET L S+ + + +K+++ +R
Sbjct: 288 MDYRDYM---KQNVQCPEANYPTFLYAMPMSHTKVFFEETCLASKDAMPFDLLKKKLFSR 344
Query: 321 LRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSMXXXXXX 380
L +G+R+K+ E+E IP+GG LP Q +A G + +VHP+TGYSV RS+
Sbjct: 345 LNTMGIRIKKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKY 404
Query: 381 XXXXXESLGS-------TRMIRGKPLYAKVWNSLWPIESRLNREFYSFGMETLLKLDLNG 433
L T+ R + L + WN+LWP E + R F+ FG+ +L+LD+ G
Sbjct: 405 ASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEG 464
Query: 434 TRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFDIV 482
R FF FF L + WQGFL S LS +L+ + +F A N R +V
Sbjct: 465 IRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMGLV 513
>Glyma15g18810.1
Length = 533
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 223/409 (54%), Gaps = 17/409 (4%)
Query: 85 FDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPD-PLSIWPNNYGVWCDEFESLGLEDCLDK 143
D+++IG GPAG+ LA + ++ G+KV + PD P + NNYGVW DEF+ LGLE C++
Sbjct: 112 LDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFT---NNYGVWEDEFKDLGLEGCIEH 168
Query: 144 TWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVFNGVRFHKAQAWKIVH-QEFES 202
W V +D ++ R YGR SR L E L+ CV +GV + ++ I+ S
Sbjct: 169 VWKDTIVFLDNKDPIFIGRSYGRASRHLLHEELLRRCVESGVSYLSSRVESIIEATNGHS 228
Query: 203 MLLCDDGTELKGSLIVDASGFGSDFVKYDKVR--NCGCQIAHGVLAEVEDHPFDLDKMVL 260
++C+ + L+ ASG S + +V Q A+GV EVE++P+D + MV
Sbjct: 229 HVVCEYDIVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVF 288
Query: 261 MDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVKRRMVAR 320
MD+RD + N++ PTFLYAMP S VF EET L S+ + + +K+++ +R
Sbjct: 289 MDYRDYM---KQNVQCPEANFPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSR 345
Query: 321 LRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSMXXXXXX 380
L +G+R+ + E+E IP+GG LP Q +A G + +VHP+TGYSV RS+
Sbjct: 346 LNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKY 405
Query: 381 XXXXXESLGS-------TRMIRGKPLYAKVWNSLWPIESRLNREFYSFGMETLLKLDLNG 433
L T+ R + L + WN+LWP E + R F+ FG+ +L+LD+ G
Sbjct: 406 ASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEG 465
Query: 434 TRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFDIV 482
R FF FF L + WQGFL S LS +L+ + +F A N R +V
Sbjct: 466 IRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRMGLV 514
>Glyma04g37200.1
Length = 209
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 282 PTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPM 341
PTF YAMP S VF EET L S+ + + +K++M +RL +G+R+K+ E+E IP+
Sbjct: 79 PTFFYAMPMSRTKVFFEETCLASKDAMPFDLLKKKMFSRLNTMGIRIKKTYEEEWSYIPV 138
Query: 342 GGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSM 374
GG LP Q +A G + + STGYSV RS+
Sbjct: 139 GGSLPNTEQKNLAFGATASMFL-STGYSVVRSL 170