Miyakogusa Predicted Gene

Lj0g3v0209599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0209599.1 Non Chatacterized Hit- tr|I1H9R9|I1H9R9_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,58.89,3e-18,
,CUFF.13443.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g37090.1                                                       172   9e-44
Glyma03g34400.1                                                       118   1e-27

>Glyma19g37090.1 
          Length = 1160

 Score =  172 bits (435), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 81/99 (81%), Positives = 90/99 (90%)

Query: 1    MASTVQAFDAPWPIIQANAMYMCGSMLSLSDNQHILADYHTQVFGMLVGKMSQSPDAIVR 60
            MASTVQAFDAPWPIIQANA+Y C SMLSLSDNQHILA YH+QVFGMLVGK+S+SPDA+VR
Sbjct: 1060 MASTVQAFDAPWPIIQANAIYFCSSMLSLSDNQHILAVYHSQVFGMLVGKLSRSPDAVVR 1119

Query: 61   ATCSSALGLLLKSSNSCSWRSVHLDREDSTIRNHDAEST 99
            AT S+ALGLLLKSS+ CSWR+V LDR +ST RNHD EST
Sbjct: 1120 ATSSAALGLLLKSSHLCSWRAVELDRLESTSRNHDVEST 1158


>Glyma03g34400.1 
          Length = 103

 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/72 (79%), Positives = 64/72 (88%)

Query: 6  QAFDAPWPIIQANAMYMCGSMLSLSDNQHILADYHTQVFGMLVGKMSQSPDAIVRATCSS 65
          QAFDAPWPIIQANA+Y   SMLSLSDNQ+ILA YH+QVF MLVGK+S SPDA+VRAT S+
Sbjct: 27 QAFDAPWPIIQANAIYFWSSMLSLSDNQYILAVYHSQVFDMLVGKLSPSPDAVVRATSSA 86

Query: 66 ALGLLLKSSNSC 77
          ALGLLLKSS+ C
Sbjct: 87 ALGLLLKSSHLC 98