Miyakogusa Predicted Gene

Lj0g3v0208169.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0208169.2 Non Chatacterized Hit- tr|I1IHS4|I1IHS4_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,46.36,1e-18,no
description,Thioredoxin-like fold; PROTEIN DISULFIDE ISOMERASE,NULL;
Thioredoxin-like,Thioredoxin,CUFF.13366.2
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10810.1                                                       295   3e-80
Glyma04g10990.1                                                       293   7e-80
Glyma04g10950.1                                                       279   1e-75
Glyma06g10790.1                                                       276   1e-74
Glyma19g28980.1                                                       103   2e-22
Glyma16g04430.1                                                        97   9e-21
Glyma02g08000.1                                                        95   6e-20
Glyma16g27000.1                                                        58   6e-09

>Glyma06g10810.1 
          Length = 321

 Score =  295 bits (754), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/197 (74%), Positives = 168/197 (85%), Gaps = 8/197 (4%)

Query: 2   MMMKIWGLKIVLAMFLCCGTLSCTAHPR--RVSLSST--VCPAETIFDFILGFPDKTCSV 57
           M M+IW L+IV A+FLC GTLSCTA P   RVSLS+T  +CPA ++ DF+LGFPD TC +
Sbjct: 1   MRMRIWVLEIVFAIFLC-GTLSCTAQPHHNRVSLSTTTSICPAGSLLDFVLGFPDSTCPL 59

Query: 58  PDSLRSIRYVGVTEGDEVTLQKALNMVHKNNQEYVAILFYASWCPFSRIFRPVFSVLSLL 117
            +SL SI    V EGDEV+LQKALNMVHKNN EYVA+LFYASWCPFSR+F+P+FSVLS L
Sbjct: 60  LNSLGSI---AVIEGDEVSLQKALNMVHKNNHEYVAVLFYASWCPFSRVFKPIFSVLSSL 116

Query: 118 YPSIPHFAIEESSVRPSTLSKYGVHGFPTLFILNSTMRVRYQGSRTLGSLVGFYSDVTGI 177
           +PSIPHFAIEESSVRPS LSKYGVHGFPTLFILNSTMRVRY GSRTLGSL+GFY+DVTGI
Sbjct: 117 HPSIPHFAIEESSVRPSILSKYGVHGFPTLFILNSTMRVRYHGSRTLGSLIGFYNDVTGI 176

Query: 178 RIDSLDQVSLDNVGRPS 194
            IDSLDQ+SL+ + R S
Sbjct: 177 MIDSLDQLSLEKISRSS 193


>Glyma04g10990.1 
          Length = 324

 Score =  293 bits (750), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 148/200 (74%), Positives = 167/200 (83%), Gaps = 11/200 (5%)

Query: 2   MMMKIWGLKIVLAMFLCCGTLSCTAHP--RRVSLSST-----VCPAETIFDFILGFPDKT 54
           M M++WG +IV A+ LC GTLSCTA     RVSLS+T     +CPA ++ DFILGFPD T
Sbjct: 1   MRMRVWGSEIVFALLLC-GTLSCTAQAIHNRVSLSTTTTTTTICPARSLLDFILGFPDST 59

Query: 55  CSVPDSLRSIRYVGVTEGDEVTLQKALNMVHKNNQEYVAILFYASWCPFSRIFRPVFSVL 114
           C +P+SL SI    VTEGDEV+LQKALNMVHKNN EYVA+LFYASWCPFSR+FR VFSVL
Sbjct: 60  CPLPNSLGSI---AVTEGDEVSLQKALNMVHKNNHEYVAVLFYASWCPFSRVFRSVFSVL 116

Query: 115 SLLYPSIPHFAIEESSVRPSTLSKYGVHGFPTLFILNSTMRVRYQGSRTLGSLVGFYSDV 174
           S L+PSIPHFAIEES VRPS LSKYGVHGFPTLFILNSTMRVRY GSRTLGSL+GFY+DV
Sbjct: 117 SALHPSIPHFAIEESLVRPSILSKYGVHGFPTLFILNSTMRVRYHGSRTLGSLIGFYNDV 176

Query: 175 TGIRIDSLDQVSLDNVGRPS 194
           TGI IDSLDQ+SL+ +GR S
Sbjct: 177 TGIMIDSLDQLSLEKIGRSS 196


>Glyma04g10950.1 
          Length = 211

 Score =  279 bits (714), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 142/197 (72%), Positives = 158/197 (80%), Gaps = 8/197 (4%)

Query: 2   MMMKIWGLKIVLAMFLCCGTLSCTA--HPRRVSLSST--VCPAETIFDFILGFPDKTCSV 57
           M + +WG +IV A+ LC GTLSCTA  H  RVSLSST  +CPA  + DFILGF D TCS+
Sbjct: 1   MRIMVWGSEIVFAILLC-GTLSCTAQAHHNRVSLSSTTAICPARPLLDFILGFSDSTCSL 59

Query: 58  PDSLRSIRYVGVTEGDEVTLQKALNMVHKNNQEYVAILFYASWCPFSRIFRPVFSVLSLL 117
           P+SL SI    VTEGDE  L KALNMVHKNN EYVA+LFYASWCPFSR+FRPVFS+LS L
Sbjct: 60  PNSLGSI---AVTEGDEFFLHKALNMVHKNNHEYVAVLFYASWCPFSRVFRPVFSILSAL 116

Query: 118 YPSIPHFAIEESSVRPSTLSKYGVHGFPTLFILNSTMRVRYQGSRTLGSLVGFYSDVTGI 177
           YPSI H AIEESSV PS LSKYGVH  PTLFILNSTMRVRY GSR  GSL+GFY+DVTGI
Sbjct: 117 YPSITHLAIEESSVWPSILSKYGVHSVPTLFILNSTMRVRYHGSRRFGSLIGFYNDVTGI 176

Query: 178 RIDSLDQVSLDNVGRPS 194
           RIDSLDQ+SL+ +G  S
Sbjct: 177 RIDSLDQLSLEKIGHSS 193


>Glyma06g10790.1 
          Length = 314

 Score =  276 bits (705), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 135/191 (70%), Positives = 158/191 (82%), Gaps = 6/191 (3%)

Query: 4   MKIWGLKIVLAMFLCCGTLSCTAHPRRVSLSSTVCPAETIFDFILGFPDKTCSVPDSLRS 63
           M+IWG +IV A+ LC GTLSCTA    ++ S+  CPA +I DF+LGF D TC +P+SL S
Sbjct: 1   MRIWGSEIVFAILLC-GTLSCTAQAHHITAST--CPARSILDFVLGFSDFTCQLPNSLGS 57

Query: 64  IRYVGVTEGDEVTLQKALNMVHKNNQEYVAILFYASWCPFSRIFRPVFSVLSLLYPSIPH 123
           I    VTEGDEV+LQK LNMVHKNN E+VA+LFYAS CPFS++ RPVFS+LS LYPSI H
Sbjct: 58  I---AVTEGDEVSLQKVLNMVHKNNHEHVAVLFYASLCPFSQVSRPVFSILSALYPSILH 114

Query: 124 FAIEESSVRPSTLSKYGVHGFPTLFILNSTMRVRYQGSRTLGSLVGFYSDVTGIRIDSLD 183
            AIEESSV PSTLSKYGVH FPTL+ILNSTMRVRY GSRTLGSL+GFY+DVTGIRIDSLD
Sbjct: 115 LAIEESSVWPSTLSKYGVHSFPTLYILNSTMRVRYHGSRTLGSLIGFYNDVTGIRIDSLD 174

Query: 184 QVSLDNVGRPS 194
           ++SL+ +GR S
Sbjct: 175 ELSLEEIGRSS 185


>Glyma19g28980.1 
          Length = 281

 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 9/106 (8%)

Query: 91  YVAILFYASWCPFSRIFRPVFSVLSLLYPSIPHFAIEESSVRPSTLSKYGVHGFPTLFIL 150
           Y++ILFYASWC FSR   P F +LS ++P + H A+E+SS  PS  SKYG+H  P + ++
Sbjct: 66  YISILFYASWCRFSRRMLPEFEILSSMFPQVQHVALEQSSALPSLYSKYGIHSLPAILLV 125

Query: 151 NSTMRVRYQGSRTLGSLVGFYSDVTGIRIDSLDQVSLDN--VGRPS 194
           N T RVRY G + L SLV FY   TG+          DN  VG+PS
Sbjct: 126 NQTSRVRYHGPKNLNSLVEFYERNTGLEAK-------DNAVVGQPS 164


>Glyma16g04430.1 
          Length = 285

 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 57/88 (64%)

Query: 91  YVAILFYASWCPFSRIFRPVFSVLSLLYPSIPHFAIEESSVRPSTLSKYGVHGFPTLFIL 150
           Y++ILFYASWCP S    P F +LS ++P + H A+E+SS  PS  SKYG+H  P + ++
Sbjct: 70  YISILFYASWCPLSCRMLPEFEILSSMFPQVQHVALEQSSALPSLYSKYGIHSLPAILLV 129

Query: 151 NSTMRVRYQGSRTLGSLVGFYSDVTGIR 178
           N T RVRY G + L  LV FY   TG+ 
Sbjct: 130 NQTSRVRYHGPKILNFLVEFYERNTGLE 157


>Glyma02g08000.1 
          Length = 299

 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 55/87 (63%)

Query: 90  EYVAILFYASWCPFSRIFRPVFSVLSLLYPSIPHFAIEESSVRPSTLSKYGVHGFPTLFI 149
           EY +ILFYASWCPFSR   P F +LS  +  + H  +E+SSV PS  SKYG+H  P + +
Sbjct: 70  EYTSILFYASWCPFSRKMLPQFEILSSTFLQVEHLVLEKSSVLPSFFSKYGIHSLPAILL 129

Query: 150 LNSTMRVRYQGSRTLGSLVGFYSDVTG 176
           +N T ++RY G   L SL  FY   TG
Sbjct: 130 VNQTSKLRYHGPNNLLSLFEFYERKTG 156


>Glyma16g27000.1 
          Length = 101

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 6/59 (10%)

Query: 90  EYVAILFYASWCPFSRIFRPVFSVLSLLYPSIPHFAIEESSVRPSTLSKYGVHGFPTLF 148
           EY +ILFYASWCPFSR   P F +LS  +  + H  +E+SSV PS      +  FP LF
Sbjct: 9   EYTSILFYASWCPFSRKILPQFEILSSTFLQVEHLVLEKSSVLPS------ISQFPLLF 61