Miyakogusa Predicted Gene

Lj0g3v0208019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0208019.1 Non Chatacterized Hit- tr|I1JJN0|I1JJN0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57232
PE,89.12,0,RNA-binding domain, RBD,NULL; CCCH zinc finger,NULL; no
description,Nucleotide-binding, alpha-beta p,CUFF.13341.1
         (485 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g10260.1                                                       731   0.0  
Glyma13g03760.1                                                       722   0.0  
Glyma02g47360.1                                                       706   0.0  
Glyma14g01390.1                                                       700   0.0  
Glyma14g08840.1                                                        57   5e-08
Glyma04g03950.1                                                        56   7e-08
Glyma15g03890.1                                                        54   3e-07
Glyma07g33300.1                                                        54   5e-07
Glyma02g15190.1                                                        53   6e-07
Glyma06g04100.1                                                        53   7e-07

>Glyma20g10260.1 
          Length = 481

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/459 (79%), Positives = 380/459 (82%), Gaps = 5/459 (1%)

Query: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREFFAE 120
           DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNRE+FAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAE 120

Query: 121 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180
           EHDRRARAG+DYESSYGKVRPNDTI+KLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYESSYGKVRPNDTIMKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180

Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMATLDAPEDESIKTLYVGGLDARVT 240
           HEMPVTGELSQQNIKDRYYGVNDPVA+KLLGKAGEM+TL+APEDESIKTLYVGGLDARVT
Sbjct: 181 HEMPVTGELSQQNIKDRYYGVNDPVALKLLGKAGEMSTLEAPEDESIKTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXXXNKLVIKGLRLKLMWGR 300
           EQDLRD+FYAHGEIESIKMVLQRACAFVTYTTR           NKLVIKGLRLKLMWGR
Sbjct: 241 EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQSAKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPP--QGRSYYP 358
           PQ++KPESDGSDQAR QASVAHSGLLPRAVISQQQNQDQ QGM+YYNNPPP  Q RSYYP
Sbjct: 301 PQTSKPESDGSDQARPQASVAHSGLLPRAVISQQQNQDQAQGMLYYNNPPPPQQERSYYP 360

Query: 359 SMDPQRMGAVTANQDXXXXXXXXXXXXXXXXEKXXXXXXXXXXXXXXXXXXXXXXXXXXX 418
           SMDPQRMGA+ ++QD                EK                           
Sbjct: 361 SMDPQRMGALVSSQDGPPGGPSGLGENKPGLEK---QQMQHYAHPMMPPQPGQYHQYYPP 417

Query: 419 XXXXXXXXXXXXXXXXXXNAVVAPSQPPAANHPYQHSMQ 457
                             NA VAPSQPPAANHPYQHSMQ
Sbjct: 418 YGYMPPPPPYHQYPPPPYNAAVAPSQPPAANHPYQHSMQ 456


>Glyma13g03760.1 
          Length = 467

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/375 (91%), Positives = 358/375 (95%), Gaps = 2/375 (0%)

Query: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREFFAE 120
           DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRD+ALSIDSNDAIPKSDVNRE+FAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDSALSIDSNDAIPKSDVNREYFAE 120

Query: 121 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180
           EHDR+ARAG+DYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
Sbjct: 121 EHDRKARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180

Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMATLDAPEDESIKTLYVGGLDARVT 240
           HEMPVTGELSQQNIKDRYYGVNDPVA+KLLGKAGEM+TL+APEDESIKTLYVGGLDARVT
Sbjct: 181 HEMPVTGELSQQNIKDRYYGVNDPVALKLLGKAGEMSTLEAPEDESIKTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXXXNKLVIKGLRLKLMWGR 300
           EQDLRD+FYAHGEIESIKMVLQRACAFVTYTTR           NKLVIKGLRLKLMWGR
Sbjct: 241 EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQSAKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNN--PPPQGRSYYP 358
           PQ+ KPESDGSDQARQQASVAHSGLLPRAVISQ+Q+QDQTQGM+YYNN  PP Q RSYYP
Sbjct: 301 PQTTKPESDGSDQARQQASVAHSGLLPRAVISQKQSQDQTQGMLYYNNLPPPQQERSYYP 360

Query: 359 SMDPQRMGAVTANQD 373
           SMDP+RMGA+ ++QD
Sbjct: 361 SMDPRRMGALVSSQD 375


>Glyma02g47360.1 
          Length = 484

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/375 (91%), Positives = 357/375 (95%), Gaps = 2/375 (0%)

Query: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMT+AEYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREFFAE 120
           DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNRE+FAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREYFAE 120

Query: 121 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180
           EHDRRARAG+DYESSYGKVRPNDTI+KLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYESSYGKVRPNDTIMKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180

Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMATLDAPEDESIKTLYVGGLDARVT 240
           HEMP TGELSQQNIKDRYYGVNDPVA+KLLGKA EM TL+APEDESIKTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAVEMNTLEAPEDESIKTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXXXNKLVIKGLRLKLMWGR 300
           EQDLRD+FYAHGEIESIKMVLQRACAFVTYTTR           NKLVIKGLRLKLMWGR
Sbjct: 241 EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQSAKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPP--QGRSYYP 358
           PQ++KPESDGSDQA+QQASVAHSGLLPRAVISQQQNQDQTQGM+YYNNPPP  Q RSYYP
Sbjct: 301 PQTSKPESDGSDQAKQQASVAHSGLLPRAVISQQQNQDQTQGMLYYNNPPPLQQERSYYP 360

Query: 359 SMDPQRMGAVTANQD 373
           SMDPQRMGA+ A++D
Sbjct: 361 SMDPQRMGALVASED 375


>Glyma14g01390.1 
          Length = 482

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/378 (91%), Positives = 357/378 (94%), Gaps = 5/378 (1%)

Query: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
           MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMT+AEYDKECKICTRPFTVFRWRPGR
Sbjct: 1   MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGR 60

Query: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSNDAIPKSDVNREFFAE 120
           DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTAL+IDS+DAIPKSDVNRE+FAE
Sbjct: 61  DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALNIDSHDAIPKSDVNREYFAE 120

Query: 121 EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180
           EHDRRARAG+DYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR 180

Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMATLDAPEDESIKTLYVGGLDARVT 240
           HEMP TGELSQQNIKDRYYGVNDPVA+KLLGKAGEM TL+APEDESIKTLYVGGLDARVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMNTLEAPEDESIKTLYVGGLDARVT 240

Query: 241 EQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXXXNKLVIKGLRLKLMWGR 300
           EQDLRD+FYAHGEIESIKMVLQRACAFVTYTTR           NKLVIKGLRLKLMWGR
Sbjct: 241 EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300

Query: 301 PQSAKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPP-----QGRS 355
           PQ++KPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPP      Q RS
Sbjct: 301 PQTSKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPGPPPLQQERS 360

Query: 356 YYPSMDPQRMGAVTANQD 373
           YYPSMDPQRMGA+ A+QD
Sbjct: 361 YYPSMDPQRMGALVASQD 378


>Glyma14g08840.1 
          Length = 425

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXX 283
           D +  T++VGGLD  V+++DLR  F  +GEI S+K+ + + C FV +  R          
Sbjct: 291 DSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR-NNAEEALQK 349

Query: 284 XNKLVIKGLRLKLMWGR 300
            N   I    ++L WGR
Sbjct: 350 LNGTSIGKQTVRLSWGR 366


>Glyma04g03950.1 
          Length = 409

 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXX 283
           D +  T++VGGLD  VT +DL+  F  +GEI S+K+ + + C FV +  R          
Sbjct: 274 DSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANR-NNAEEALQK 332

Query: 284 XNKLVIKGLRLKLMWGRPQSAK 305
            N   I    ++L WGR  + K
Sbjct: 333 LNGTTIGKQMVRLSWGRSPANK 354


>Glyma15g03890.1 
          Length = 294

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXX 283
           D +   ++VG LD  V+E++L+ NF   GEI S+K+   + C FV + TR          
Sbjct: 98  DVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQKM 157

Query: 284 XNKLVIKGLRLKLMWGRPQSAKPESDG 310
             K++ + + +++ WGR  +A+ +  G
Sbjct: 158 QEKMIGQQV-VRISWGRTLTARQDLPG 183


>Glyma07g33300.1 
          Length = 431

 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXX 283
           D +  T++VGGLD+  +++DLR  F   GE+ S+K+ + + C FV +  R          
Sbjct: 310 DLNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADR-KNAEEAIHA 368

Query: 284 XNKLVIKGLRLKLMWGR-PQSAKPESDGSDQARQQASVAHSGLLPRAVISQQQNQD 338
            N  VI    ++L WGR P +    SD +       S    G   R      QNQD
Sbjct: 369 LNGTVIGKQTVRLSWGRSPGNKHWRSDSNGGYFGGQSYGGHGFAVR------QNQD 418


>Glyma02g15190.1 
          Length = 431

 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 229 TLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXXXNKLV 288
           T++VGGLD+  +++DLR  F   GE+ S+K+ + + C FV +  R           N  V
Sbjct: 314 TIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADR-KNAEEAIQGLNGTV 372

Query: 289 IKGLRLKLMWGR 300
           I    ++L WGR
Sbjct: 373 IGKQTVRLSWGR 384


>Glyma06g04100.1 
          Length = 378

 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESIKMVLQRACAFVTYTTRXXXXXXXXXX 283
           D +  T++VGGLD+ VT +DL+  F  +GEI S+K+ + + C F    +R          
Sbjct: 272 DSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTICNSRSPGPKNAEEA 331

Query: 284 XNKL---VIKGLRLKLMWGR 300
             KL    I    ++L WGR
Sbjct: 332 LQKLNGTTIGKQMVRLSWGR 351