Miyakogusa Predicted Gene

Lj0g3v0207679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207679.1 tr|I0Z1L2|I0Z1L2_9CHLO DNA glycosylase
OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,48.45,3e-19,DNA-glycosylase,DNA glycosylase; HhH-GPD,HhH-GPD
domain; no description,DNA glycosylase; 5-METHYLCYT,CUFF.13312.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11620.1                                                       155   9e-39

>Glyma13g11620.1 
          Length = 259

 Score =  155 bits (392), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 84/101 (83%), Gaps = 1/101 (0%)

Query: 7   QVRAVISDFFRLCPDAQTCTQVSKDEIVEVIRKLGL-HKRAAMLQRFSREYLEENWTHVT 65
           Q + V+S+FF+LCPDA++CTQV+++EI + I+ LG  HKRA MLQR S EYL+E+WTHVT
Sbjct: 155 QTKKVVSNFFKLCPDAKSCTQVTREEIEKTIKTLGFQHKRAEMLQRLSEEYLDESWTHVT 214

Query: 66  QLHGVGKYAADAYAIFCTGKWDRVTPSDHKLVKYWEFLRLI 106
           QLHGVGKYAADAYAIF TG WDRVTP+DH L  YWEFL  I
Sbjct: 215 QLHGVGKYAADAYAIFVTGMWDRVTPTDHMLNYYWEFLHSI 255