Miyakogusa Predicted Gene
- Lj0g3v0206979.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0206979.1 CUFF.13380.1
(136 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g00980.1 178 2e-45
Glyma07g14950.1 177 4e-45
Glyma15g18790.1 100 4e-22
Glyma09g07570.1 100 4e-22
Glyma04g06440.1 75 2e-14
Glyma06g06480.1 75 3e-14
Glyma17g23500.1 61 3e-10
Glyma17g23500.2 60 6e-10
Glyma13g26190.1 60 8e-10
>Glyma01g00980.1
Length = 795
Score = 178 bits (451), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 88/94 (93%)
Query: 42 SGLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNYKLKIGVCPSCK 101
GLR+GEMERDCLIAYGASMLI+ERLMLSSDPFEVQVC +CGLLGYYN+KLK G+C SCK
Sbjct: 701 GGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCK 760
Query: 102 NGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 135
NGD IS MKLPYACKL+IQELQSMNIVPRLKLAD
Sbjct: 761 NGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 794
>Glyma07g14950.1
Length = 134
Score = 177 bits (448), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 88/94 (93%)
Query: 42 SGLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNYKLKIGVCPSCK 101
GLR+GEMERDCLIAYGASMLI+ERLMLSSDPFEVQVC +CGLLGYYN+KLK G+C SCK
Sbjct: 40 GGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCK 99
Query: 102 NGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 135
NGD IS MKLPYACKL+IQELQSMNIVPRLKLAD
Sbjct: 100 NGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 133
>Glyma15g18790.1
Length = 1193
Score = 100 bits (249), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 56/89 (62%)
Query: 43 GLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNYKLKIGVCPSCKN 102
GLR GEMERDC+IA+GA+ + ERL SD + V VC CGL+ N K C CKN
Sbjct: 1090 GLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKN 1149
Query: 103 GDQISNMKLPYACKLLIQELQSMNIVPRL 131
I + +PYACKLL QEL +M I PR+
Sbjct: 1150 KTDIVQVYIPYACKLLFQELMAMAIAPRM 1178
>Glyma09g07570.1
Length = 1192
Score = 100 bits (249), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 56/89 (62%)
Query: 43 GLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNYKLKIGVCPSCKN 102
GLR GEMERDC+IA+GA+ + ERL SD + V VC CGL+ N K C CKN
Sbjct: 1090 GLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKN 1149
Query: 103 GDQISNMKLPYACKLLIQELQSMNIVPRL 131
I + +PYACKLL QEL +M I PR+
Sbjct: 1150 KTDIVQVYIPYACKLLFQELMAMAIAPRM 1178
>Glyma04g06440.1
Length = 1086
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 41 FSGLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYY-------NYKLK 93
F G++ GEMERDCLIA+GAS ++ERL SD ++ +C C + K++
Sbjct: 984 FGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGRKIR 1043
Query: 94 IGVCPSCKNGDQISNMKLPYACKLLIQELQSMNI 127
C C++ D I +PY KLL QEL SM I
Sbjct: 1044 GPYCRHCESADDIVVAHVPYGAKLLCQELFSMGI 1077
>Glyma06g06480.1
Length = 1124
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 41 FSGLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYY-------NYKLK 93
F G++ GEMERDCLIA+GAS ++ERL SD ++ +C C + K++
Sbjct: 1022 FGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIR 1081
Query: 94 IGVCPSCKNGDQISNMKLPYACKLLIQELQSMNI 127
C C++ D I +PY KLL QEL SM I
Sbjct: 1082 GPYCRHCESADDIVVAHVPYGAKLLCQELFSMGI 1115
>Glyma17g23500.1
Length = 982
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 43 GLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNYKL-------KIG 95
G+R GEMERD L+A+GA+ L+ +RL SD VC CG + + +IG
Sbjct: 866 GIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIG 925
Query: 96 -----------VCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 135
C +C+ + + +PY + L EL +MNI LKL+D
Sbjct: 926 GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSD 976
>Glyma17g23500.2
Length = 260
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 42 SGLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNYK-------LKI 94
G+R GEMERD L+A+GA+ L+ +RL SD VC CG + + +I
Sbjct: 143 GGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREI 202
Query: 95 G-----------VCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 135
G C +C+ + + +PY + L EL +MNI LKL+D
Sbjct: 203 GGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSD 254
>Glyma13g26190.1
Length = 1223
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 42 SGLRIGEMERDCLIAYGASMLIFERLMLSSDPFEVQVCRSCGLLGYYNY----------- 90
G+R GEMERD L+A+GA+ L+ +RL SD VC CG + +
Sbjct: 1106 GGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREI 1165
Query: 91 -------KLKIGVCPSCKNGDQISNMKLPYACKLLIQELQSMNIVPRLKLAD 135
K C +C+ + + +PY + L EL +MNI LKL+D
Sbjct: 1166 GGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSD 1217