Miyakogusa Predicted Gene
- Lj0g3v0206779.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0206779.1 Non Chatacterized Hit- tr|C4J6G1|C4J6G1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,34.93,1e-18,UNCHARACTERIZED,NULL; SERINE INCORPORATOR,TMS
membrane protein/tumour differentially expressed prote,CUFF.13239.1
(310 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g19930.1 434 e-122
Glyma05g35320.1 226 3e-59
Glyma08g04410.1 225 4e-59
Glyma09g32070.1 216 3e-56
Glyma07g09740.1 214 1e-55
Glyma10g25580.1 120 2e-27
Glyma08g46830.1 116 4e-26
Glyma18g36750.1 112 5e-25
Glyma02g22040.1 112 7e-25
Glyma08g46830.2 103 2e-22
Glyma08g46830.3 102 4e-22
Glyma13g28010.1 88 1e-17
>Glyma20g19930.1
Length = 420
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/266 (80%), Positives = 233/266 (87%), Gaps = 12/266 (4%)
Query: 15 HIQVSDRPS--TEEVTASLD----DYAAERKKSLQARYYFGIIFLIMNLVAWFFRDYGQS 68
H+ + D S E V ASL+ DYA ER KSL+ARYYFGIIFLIMNLVAWFFRDYGQS
Sbjct: 14 HVNLRDTQSMLEEGVIASLELNKVDYAVERNKSLRARYYFGIIFLIMNLVAWFFRDYGQS 73
Query: 69 LLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIFFLIMFLTTVNTRKLCEGRNSWHSGW 128
+LLP++HYIKVCGNEG+DCFHSLGVLR IFFL+MFLTTV TRKLCE +N WHSGW
Sbjct: 74 VLLPFIHYIKVCGNEGDDCFHSLGVLR------IFFLVMFLTTVKTRKLCEHQNLWHSGW 127
Query: 129 WELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDE 188
WE+KS+LLLVSM LPF FPSE VQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDE
Sbjct: 128 WEVKSVLLLVSMALPFFFPSELVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDE 187
Query: 189 ERKQRCSVGLSMSTMFYVAAICGVVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLN 248
ERKQRCS+GL +STMFYVA+I G+VY+YTSYASR+SCSLNIFFITWT ILL MM+ISLN
Sbjct: 188 ERKQRCSLGLFLSTMFYVASISGIVYLYTSYASRTSCSLNIFFITWTVILLAAMMVISLN 247
Query: 249 SKVNRGLLSSGIMASYIVFLCWCAIR 274
SKVNRGLLSSGIMASY+VFLCW AIR
Sbjct: 248 SKVNRGLLSSGIMASYVVFLCWNAIR 273
>Glyma05g35320.1
Length = 383
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 158/227 (69%), Gaps = 4/227 (1%)
Query: 44 ARYYFGIIFLIMNLVAWFFRDYGQSLLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIF 103
ARY + +IFL+ NL+AW RDYG+ L + +K C N G+DC + GVLRV+LGC IF
Sbjct: 34 ARYAYALIFLVANLLAWAARDYGRGALTE-MKRLKGC-NGGKDCLDAEGVLRVNLGCFIF 91
Query: 104 FLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAG 163
++IMFL+T T KL R++WHSGWW +K L +V+ +PFL PSEF+QIYGE+A GAG
Sbjct: 92 YIIMFLSTARTSKLNNVRDTWHSGWWSVKIALWVVTTVIPFLLPSEFIQIYGEVAHFGAG 151
Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLS-MSTMFYVAAICGVVYMYTSYASR 222
+FLL+QL+S+I FITW N+ E+ RC + + +T YV + G++ MY YA +
Sbjct: 152 VFLLIQLISIISFITWLNEC-CESEKFAARCRIHVMFFATTAYVVCLMGIILMYIWYAPK 210
Query: 223 SSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLC 269
SC LNIFFITWT +LL +M +SL+ KV+ G+L+ G+M Y+VFLC
Sbjct: 211 PSCLLNIFFITWTLVLLQLMTSVSLHPKVDAGILTPGLMGLYVVFLC 257
>Glyma08g04410.1
Length = 393
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 158/227 (69%), Gaps = 4/227 (1%)
Query: 44 ARYYFGIIFLIMNLVAWFFRDYGQSLLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIF 103
ARY + +IFL+ NL+AW RDYG+ L + K C N G+DC + GVLRVSLGC IF
Sbjct: 34 ARYAYALIFLVANLLAWAARDYGRGALTE-MKRFKGC-NGGKDCLDAEGVLRVSLGCFIF 91
Query: 104 FLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAG 163
++IMFL+T T KL R++WHSGWW +K L +V+ +PFL P+EF+QIYGE+A GAG
Sbjct: 92 YIIMFLSTARTSKLNNLRDTWHSGWWSVKIALWVVTTAIPFLLPTEFIQIYGEVAHFGAG 151
Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLS-MSTMFYVAAICGVVYMYTSYASR 222
+FLL+QL+S+I FITW N+ + E+ RC + + +T YV + G++ MY Y+ +
Sbjct: 152 VFLLIQLISIISFITWLNEC-SESEKFASRCRIHVMFFATTAYVVCLMGIILMYIWYSPK 210
Query: 223 SSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLC 269
SC LNIFFITWT +LL +M +SL+ KV+ G+L+ G+M Y+VFLC
Sbjct: 211 PSCLLNIFFITWTLVLLQLMTSVSLHPKVDAGILTPGLMGLYVVFLC 257
>Glyma09g32070.1
Length = 402
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 160/233 (68%), Gaps = 4/233 (1%)
Query: 44 ARYYFGIIFLIMNLVAWFFRDYGQSL-LLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHI 102
ARY +G+IFL+ NL+AW RD SL L + +K C G++C + GVLRVS+GC +
Sbjct: 37 ARYVYGLIFLVANLLAWAARDELSSLSALTEMKGLKGC-KVGKNCLGADGVLRVSMGCFL 95
Query: 103 FFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGA 162
F++IMF +T T KL EGR+ WHSGWW +K ++L++ PFL PSE + +YG+IA GA
Sbjct: 96 FYMIMFWSTAGTSKLKEGRDEWHSGWWLVKIVVLVLVTIFPFLLPSELIDLYGQIAHFGA 155
Query: 163 GIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYTSYAS 221
G+FLL+QL+S+I FI W + E+ +RC + + + +T+ Y + G++ MY YA
Sbjct: 156 GVFLLIQLISIISFINWLTDCFG-SEKYAERCQIQVMLFATISYFICLVGIILMYIWYAP 214
Query: 222 RSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
+ SC LNIFFITWT +LL +M +SL+ KVN G+LS G+M Y+VFLCWCAIR
Sbjct: 215 QPSCLLNIFFITWTLVLLQLMTSVSLHPKVNAGILSPGLMGLYVVFLCWCAIR 267
>Glyma07g09740.1
Length = 401
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 170/263 (64%), Gaps = 9/263 (3%)
Query: 19 SDRPSTEEVTASLDD---YAAERKKS--LQARYYFGIIFLIMNLVAWFFRDYGQSL-LLP 72
S+ S+ + A + D Y R S ARY +G+IFL+ NL+AW RD SL L
Sbjct: 6 SNSTSSNQSCAVMKDSKWYTQFRNVSNPWMARYVYGLIFLVANLLAWAARDELSSLSALT 65
Query: 73 WVHYIKVCGNEGEDCFHSLGVLRVSLGCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELK 132
+ +K C G+DC + GVLRVS+GC +F++IMF +T T KL EGR+ W SGWW +K
Sbjct: 66 EMKGLKGC-KVGKDCLGADGVLRVSMGCFLFYMIMFWSTAGTSKLKEGRDEWQSGWWLVK 124
Query: 133 SILLLVSMTLPFLFPSEFVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQ 192
++L++ PF+ PSE + +YG++A GAG+FLL+QL+S+I FI W + E+ +
Sbjct: 125 IVVLVLVTIFPFILPSELIDLYGQVAHFGAGVFLLIQLISIISFINWLTDCFD-SEKYAE 183
Query: 193 RCSVGLSM-STMFYVAAICGVVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLNSKV 251
+C + + + +T+ Y + G++ MY YA + SC LNIFFITWT +LL +M +SL+ KV
Sbjct: 184 KCQIQVMLFATISYFICLVGIILMYIWYAPQPSCLLNIFFITWTLVLLQLMTSVSLHPKV 243
Query: 252 NRGLLSSGIMASYIVFLCWCAIR 274
N G+LS G+M Y+VFLCWCAIR
Sbjct: 244 NAGILSPGLMGLYVVFLCWCAIR 266
>Glyma10g25580.1
Length = 172
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 11/88 (12%)
Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVAAICGVVYMYTSYASRS 223
+FLLLQLVSVIHFITWWNK CS+GL MST+FY+ ++CG+VY+YTSYASR+
Sbjct: 1 VFLLLQLVSVIHFITWWNK-----------CSLGLFMSTLFYITSLCGIVYLYTSYASRT 49
Query: 224 SCSLNIFFITWTAILLLVMMIISLNSKV 251
SCSLNIFFITWT ILL +M+ISLNSKV
Sbjct: 50 SCSLNIFFITWTVILLAAIMVISLNSKV 77
>Glyma08g46830.1
Length = 410
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 43 QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
AR + +F +VAW R+ L+ LPW+++ K + F + VLRVSLG
Sbjct: 30 SARIAYCGLFAFSLVVAWILREVAAPLMESLPWINHFK--HTPSREWFETDAVLRVSLGN 87
Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
+FF I+ + V + + R+S H G W +K I + + F P+E + Y I++
Sbjct: 88 FLFFTILAVLMVGVKTQRDPRDSMHHGGWMMKIICWCLLVIFMFFVPNEIISFYETISKF 147
Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVA--AICGVVYMYTS 218
G+G+FLL+Q++ ++ F+ WN W +E+ ++ +S + YVA A GV++ + +
Sbjct: 148 GSGMFLLVQVMLLLDFVHGWNDKWVGYDEQFWYIAL-FVVSLVCYVATFAFSGVLFHFFT 206
Query: 219 YASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAI 273
S C LN+FFIT T IL V I++L+ VN +L + +++ Y +LC+ A+
Sbjct: 207 -PSGQDCGLNVFFITMTMILAFVFAIVALHPAVNGSVLPASVISLYCTYLCYSAL 260
>Glyma18g36750.1
Length = 410
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 131/238 (55%), Gaps = 14/238 (5%)
Query: 43 QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
AR + +F +VAW R+ L+ LP +++ K + F + VLRVSLG
Sbjct: 30 SARIAYCGLFAFSLVVAWILREVAAPLMESLPGINHFK--HTPSREWFETDAVLRVSLGN 87
Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSI---LLLVSMTLPFLFPSEFVQIYGEI 157
+FF I+ + V + + R+S H G W +K I LL++SM F P+E + Y I
Sbjct: 88 FLFFTILAILMVGVKTQRDPRDSMHHGGWMMKIICWCLLVISM---FFIPNEIISFYETI 144
Query: 158 ARIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVA--AICGVVYM 215
++ G+G+FLL+Q++ ++ F+ WN W +E+ ++ +S + YVA A GV++
Sbjct: 145 SKFGSGMFLLVQVMLLLDFVHGWNDKWVGFDEQFWYIAL-FVVSLVCYVATFAFSGVLFH 203
Query: 216 YTSYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAI 273
+ + S C LN+FFIT T IL + I++L+ VN +L + +++ Y +LC+ A+
Sbjct: 204 FFT-PSGHDCGLNVFFITMTLILAFIFAIVALHPAVNGSVLPASVISLYCTYLCYSAL 260
>Glyma02g22040.1
Length = 114
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 67/104 (64%), Gaps = 18/104 (17%)
Query: 77 IKVCGNEGEDCFHSLGVLRVS-----------LGC-------HIFFLIMFLTTVNTRKLC 118
IKVCGNEG+DCFHSLGV +S C IFFL+M+LT V TRK
Sbjct: 10 IKVCGNEGDDCFHSLGVFHLSKFMLHNESLHTRACADTHTIVQIFFLVMYLTAVKTRKSW 69
Query: 119 EGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGA 162
E R WHSGWWE+KS+LLLVSM L F FPSE VQIYG I IGA
Sbjct: 70 EYRILWHSGWWEVKSVLLLVSMVLSFFFPSELVQIYGGIDCIGA 113
>Glyma08g46830.2
Length = 258
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 116/215 (53%), Gaps = 8/215 (3%)
Query: 43 QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
AR + +F +VAW R+ L+ LPW+++ K + F + VLRVSLG
Sbjct: 30 SARIAYCGLFAFSLVVAWILREVAAPLMESLPWINHFK--HTPSREWFETDAVLRVSLGN 87
Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
+FF I+ + V + + R+S H G W +K I + + F P+E + Y I++
Sbjct: 88 FLFFTILAVLMVGVKTQRDPRDSMHHGGWMMKIICWCLLVIFMFFVPNEIISFYETISKF 147
Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVA--AICGVVYMYTS 218
G+G+FLL+Q++ ++ F+ WN W +E+ ++ +S + YVA A GV++ + +
Sbjct: 148 GSGMFLLVQVMLLLDFVHGWNDKWVGYDEQFWYIAL-FVVSLVCYVATFAFSGVLFHFFT 206
Query: 219 YASRSSCSLNIFFITWTAILLLVMMIISLNSKVNR 253
S C LN+FFIT T IL V I++L+ V++
Sbjct: 207 -PSGQDCGLNVFFITMTMILAFVFAIVALHPAVSK 240
>Glyma08g46830.3
Length = 247
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 115/214 (53%), Gaps = 8/214 (3%)
Query: 43 QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
AR + +F +VAW R+ L+ LPW+++ K + F + VLRVSLG
Sbjct: 30 SARIAYCGLFAFSLVVAWILREVAAPLMESLPWINHFK--HTPSREWFETDAVLRVSLGN 87
Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
+FF I+ + V + + R+S H G W +K I + + F P+E + Y I++
Sbjct: 88 FLFFTILAVLMVGVKTQRDPRDSMHHGGWMMKIICWCLLVIFMFFVPNEIISFYETISKF 147
Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVA--AICGVVYMYTS 218
G+G+FLL+Q++ ++ F+ WN W +E+ ++ +S + YVA A GV++ + +
Sbjct: 148 GSGMFLLVQVMLLLDFVHGWNDKWVGYDEQFWYIAL-FVVSLVCYVATFAFSGVLFHFFT 206
Query: 219 YASRSSCSLNIFFITWTAILLLVMMIISLNSKVN 252
S C LN+FFIT T IL V I++L+ V+
Sbjct: 207 -PSGQDCGLNVFFITMTMILAFVFAIVALHPAVS 239
>Glyma13g28010.1
Length = 367
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 43 QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
AR + +F + +V+W R+ G LL PW+ + + + VLRVSLG
Sbjct: 27 SARIGYCGLFGVSLVVSWILREVGAPLLEKFPWIG--GTSDTNTTEWYQAQAVLRVSLGN 84
Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
+FF I+ L + + + R+SWH G W K ++ L+ + L F P + +YG IA+I
Sbjct: 85 FLFFGILALIMIGVKDQNDRRDSWHHGGWTAKIVIWLLLVVLAFFLPDAIILVYGFIAKI 144
Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERK 191
GAG+FLL+Q++ ++ F WN W +E+K
Sbjct: 145 GAGLFLLIQVIILLDFTHTWNDAWVEKDEQK 175